Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
Experiments
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[Homology]
Score
TM_1147Conserved hypothetical protein; Similar to PID:558266 percent identity: 58.48; identified by sequence similarity; putative. (387 aa)    
Predicted Functional Partners:
TM_0972
Conserved hypothetical protein, GGDEF domain; Similar to GB:AE000657 percent identity: 63.80; identified by sequence similarity; putative.
 
  
 0.933
TM_1788
Conserved hypothetical protein, GGDEF domain; Similar to GB:AE000657 percent identity: 60.13; identified by sequence similarity; putative.
 
  
 0.898
TM_1184
pleD-related protein; Similar to PID:1652841 percent identity: 50.78; identified by sequence similarity; putative.
 0.799
mcp3
Methyl-accepting chemotaxis protein; Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of methylation.
   
  0.792
TM_1148
Isocitrate dehydrogenase; Similar to SP:P21954 PID:1431074 PID:171749 percent identity: 74.63; identified by sequence similarity; putative; Belongs to the isocitrate and isopropylmalate dehydrogenases family.
       0.773
TM_0143
Response regulator; Similar to PID:1651878 percent identity: 53.02; identified by sequence similarity; putative.
 
 0.699
ribBA
GTP cyclohydrolase II/3,4-dihydroxy-2-butanone 4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the N-terminal section; belongs to the DHBP synthase family.
     
  0.591
TM_0221
Flagellar M-ring protein; The M ring may be actively involved in energy transduction. Belongs to the FliF family.
   
    0.569
TM_1588
Conserved hypothetical protein, GGDEF domain; Similar to GB:AE000657 percent identity: 57.07; identified by sequence similarity; putative.
 
  
 0.523
TM_1163
Conserved hypothetical protein, GGDEF domain; Similar to GB:AE000657 percent identity: 57.24; identified by sequence similarity; putative.
  
  
 0.472
Your Current Organism:
Thermotoga maritima
NCBI taxonomy Id: 243274
Other names: T. maritima MSB8, Thermotoga maritima DSM 3109, Thermotoga maritima MSB8, Thermotoga maritima str. MSB8, Thermotoga maritima strain MSB8
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