STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TM_1163Conserved hypothetical protein, GGDEF domain; Similar to GB:AE000657 percent identity: 57.24; identified by sequence similarity; putative. (490 aa)    
Predicted Functional Partners:
TM_1164
2-oxoacid ferredoxin oxidoreductase, alpha subunit; Similar to GB:AE000666 percent identity: 68.99; identified by sequence similarity; putative.
       0.810
TM_1165
2-oxoacid ferredoxin oxidoreductase, beta subunit; Similar to GB:AE000666 percent identity: 77.82; identified by sequence similarity; putative.
       0.810
TM_1166
Oxygen-independent coproporphyrinogen III oxidase, putative; Probably acts as a heme chaperone, transferring heme to an unknown acceptor. Binds one molecule of heme per monomer, possibly covalently. Binds 1 [4Fe-4S] cluster. The cluster is coordinated with 3 cysteines and an exchangeable S-adenosyl-L-methionine. Belongs to the anaerobic coproporphyrinogen-III oxidase family.
       0.810
TM_1167
Hypothetical protein; Identified by sequence similarity; putative.
       0.810
TM_1162
Conserved hypothetical protein; Similar to GB:AE000782 percent identity: 67.69; identified by sequence similarity; putative; Belongs to the UPF0173 family.
       0.788
TM_1830
Conserved hypothetical protein; Similar to GB:AE000657 percent identity: 71.11; identified by sequence similarity; putative.
  
     0.775
TM_1184
pleD-related protein; Similar to PID:1652841 percent identity: 50.78; identified by sequence similarity; putative.
 
 
0.630
TM_1170
ABC transporter, periplasmic substrate-binding protein/conserved hypothetical protein; Similar to GB:U00096 SP:P39174 PID:1736579 PID:1736587 PID:1788228 percent identity: 46.34; identified by sequence similarity; putative.
 0.580
TM_1147
Conserved hypothetical protein; Similar to PID:558266 percent identity: 58.48; identified by sequence similarity; putative.
 
 
  0.534
TM_1145
Conserved hypothetical protein; Similar to PID:558266 percent identity: 56.47; identified by sequence similarity; putative.
 
  0.523
Your Current Organism:
Thermotoga maritima
NCBI taxonomy Id: 243274
Other names: T. maritima MSB8, Thermotoga maritima DSM 3109, Thermotoga maritima MSB8, Thermotoga maritima str. MSB8, Thermotoga maritima strain MSB8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.