STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TM_1175Ferredoxin; Similar to GB:L77117 SP:Q57652 PID:1590944 percent identity: 52.54; identified by sequence similarity; putative. (70 aa)    
Predicted Functional Partners:
TM_1217
Glutamate synthase, beta subunit; Similar to PID:2244618 percent identity: 58.52; identified by sequence similarity; putative.
  
 0.926
TM_1164
2-oxoacid ferredoxin oxidoreductase, alpha subunit; Similar to GB:AE000666 percent identity: 68.99; identified by sequence similarity; putative.
  
 
 0.888
TM_1815
Ferredoxin; Similar to GB:L77117 SP:Q57699 PID:1499030 percent identity: 60.56; identified by sequence similarity; putative.
  
   
 0.854
TM_1174
Hypothetical protein; Identified by sequence similarity; putative.
     
 0.795
TM_1176
Transcriptional regulator, metal-sensing; Similar to GB:AE000666 percent identity: 63.86; identified by sequence similarity; putative.
     
 0.792
ldh
L-lactate dehydrogenase; Catalyzes the conversion of lactate to pyruvate. It is stereospecific for L(+)-lactate.
  
 
 0.732
TM_1173
Conserved hypothetical protein; Similar to GB:Pyro_h percent identity: 58.51; identified by sequence similarity; putative.
     
 0.672
TM_0010
NADP-reducing hydrogenase, subunit C; Similar to GB:U07229 PID:466365 percent identity: 78.67; identified by sequence similarity; putative.
  
 
 0.671
TM_1181
Conserved hypothetical protein; Similar to SP:P54570 PID:1303984 GB:AL009126 percent identity: 71.93; identified by sequence similarity; putative; Belongs to the Nudix hydrolase family.
    
  0.629
TM_1425
Fe-hydrogenase, subunit beta; Similar to GP:2865516 percent identity: 100.00; identified by sequence similarity; putative.
  
 
 0.577
Your Current Organism:
Thermotoga maritima
NCBI taxonomy Id: 243274
Other names: T. maritima MSB8, Thermotoga maritima DSM 3109, Thermotoga maritima MSB8, Thermotoga maritima str. MSB8, Thermotoga maritima strain MSB8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.