STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TM_1177Conserved hypothetical protein; Similar to GB:AL009126 percent identity: 58.00; identified by sequence similarity; putative. (225 aa)    
Predicted Functional Partners:
TM_1178
Acetyltransferase-related protein; Similar to GB:AE000657 percent identity: 50.40; identified by sequence similarity; putative.
  
    0.816
TM_1181
Conserved hypothetical protein; Similar to SP:P54570 PID:1303984 GB:AL009126 percent identity: 71.93; identified by sequence similarity; putative; Belongs to the Nudix hydrolase family.
  
 
  0.816
TM_1179
Flagellar protein FliS; Similar to GB:M85241 SP:P26609 GB:X52093 PID:153987 percent identity: 56.80; identified by sequence similarity; putative.
       0.810
TM_1180
Hypothetical protein; Identified by sequence similarity; putative.
       0.762
smc
Chromosome segregation SMC protein, putative; Required for chromosome condensation and partitioning. Belongs to the SMC family.
       0.762
TM_1828
Riboflavin-specific deaminase; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family.
    
 0.718
TM_0703
Competence-damage inducible protein, putative; Similar to GB:AL009126 percent identity: 61.61; identified by sequence similarity; putative; Belongs to the CinA family.
    
  0.580
TM_1174
Hypothetical protein; Identified by sequence similarity; putative.
       0.559
TM_1175
Ferredoxin; Similar to GB:L77117 SP:Q57652 PID:1590944 percent identity: 52.54; identified by sequence similarity; putative.
       0.559
TM_1176
Transcriptional regulator, metal-sensing; Similar to GB:AE000666 percent identity: 63.86; identified by sequence similarity; putative.
       0.559
Your Current Organism:
Thermotoga maritima
NCBI taxonomy Id: 243274
Other names: T. maritima MSB8, Thermotoga maritima DSM 3109, Thermotoga maritima MSB8, Thermotoga maritima str. MSB8, Thermotoga maritima strain MSB8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.