Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TM_1178Acetyltransferase-related protein; Similar to GB:AE000657 percent identity: 50.40; identified by sequence similarity; putative. (279 aa)    
Predicted Functional Partners:
aroKB
Shikimate kinase/3-dehydroquinate synthase; Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate; In the C-terminal section; belongs to the sugar phosphate cyclases superfamily. Dehydroquinate synthase family.
 
  
  0.837
TM_1177
Conserved hypothetical protein; Similar to GB:AL009126 percent identity: 58.00; identified by sequence similarity; putative.
  
    0.817
TM_1179
Flagellar protein FliS; Similar to GB:M85241 SP:P26609 GB:X52093 PID:153987 percent identity: 56.80; identified by sequence similarity; putative.
       0.817
smc
Chromosome segregation SMC protein, putative; Required for chromosome condensation and partitioning. Belongs to the SMC family.
  
  
 0.779
TM_1181
Conserved hypothetical protein; Similar to SP:P54570 PID:1303984 GB:AL009126 percent identity: 71.93; identified by sequence similarity; putative; Belongs to the Nudix hydrolase family.
  
    0.771
TM_1704
Hypothetical protein; Identified by sequence similarity; putative.
  
     0.771
TM_1180
Hypothetical protein; Identified by sequence similarity; putative.
       0.770
TM_0656
Conserved hypothetical protein; Similar to SP:P38522 GB:U00096 PID:1742120 PID:1742129 PID:1787557 percent identity: 56.60; identified by sequence similarity; putative.
 
 
 0.754
TM_0806
Hypothetical protein; Identified by sequence similarity; putative.
  
     0.730
TM_0756
Galactosyltransferase-related protein; Similar to GP:2198543 percent identity: 61.83; identified by sequence similarity; putative.
 
 
 0.709
Your Current Organism:
Thermotoga maritima
NCBI taxonomy Id: 243274
Other names: T. maritima MSB8, Thermotoga maritima DSM 3109, Thermotoga maritima MSB8, Thermotoga maritima str. MSB8, Thermotoga maritima strain MSB8
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