STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
smcChromosome segregation SMC protein, putative; Required for chromosome condensation and partitioning. Belongs to the SMC family. (1170 aa)    
Predicted Functional Partners:
TM_0493
Conserved hypothetical protein; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves.
 
 
 0.906
TM_1180
Hypothetical protein; Identified by sequence similarity; putative.
       0.814
TM_1181
Conserved hypothetical protein; Similar to SP:P54570 PID:1303984 GB:AL009126 percent identity: 71.93; identified by sequence similarity; putative; Belongs to the Nudix hydrolase family.
       0.813
TM_0494
Conserved hypothetical protein; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves.
 
 
 0.806
TM_0990
Conserved hypothetical protein; Similar to GB:Pyro_h percent identity: 71.88; identified by sequence similarity; putative.
  
 0.805
TM_1178
Acetyltransferase-related protein; Similar to GB:AE000657 percent identity: 50.40; identified by sequence similarity; putative.
  
  
 0.779
TM_1179
Flagellar protein FliS; Similar to GB:M85241 SP:P26609 GB:X52093 PID:153987 percent identity: 56.80; identified by sequence similarity; putative.
       0.777
TM_1177
Conserved hypothetical protein; Similar to GB:AL009126 percent identity: 58.00; identified by sequence similarity; putative.
       0.762
TM_1184
pleD-related protein; Similar to PID:1652841 percent identity: 50.78; identified by sequence similarity; putative.
    
 0.691
TM_1183
Oxidoreductase, aldo/keto reductase family; Similar to GB:AE000666 percent identity: 61.05; identified by sequence similarity; putative.
       0.569
Your Current Organism:
Thermotoga maritima
NCBI taxonomy Id: 243274
Other names: T. maritima MSB8, Thermotoga maritima DSM 3109, Thermotoga maritima MSB8, Thermotoga maritima str. MSB8, Thermotoga maritima strain MSB8
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