STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TM_1187Conserved hypothetical protein; Similar to GB:AL009126 percent identity: 55.00; identified by sequence similarity; putative. (324 aa)    
Predicted Functional Partners:
TM_1186
Hypothetical protein; Identified by sequence similarity; putative.
       0.813
TM_1188
Hypothetical protein; Identified by sequence similarity; putative.
       0.572
TM_0706
Hypothetical protein; Identified by sequence similarity; putative.
 
    0.569
TM_0620
Lipopolysaccharide biosynthesis protein; Similar to GP:1276886 percent identity: 50.35; identified by sequence similarity; putative.
  
    0.544
TM_0609
Hypothetical protein; Identified by sequence similarity; putative.
  
     0.516
TM_1704
Hypothetical protein; Identified by sequence similarity; putative.
  
     0.487
TM_0930
Conserved hypothetical protein; Similar to GB:L77117 SP:Q58222 PID:1591501 percent identity: 48.77; identified by sequence similarity; putative.
  
     0.457
TM_0929
Hypothetical protein; Identified by sequence similarity; putative.
  
     0.449
TM_0756
Galactosyltransferase-related protein; Similar to GP:2198543 percent identity: 61.83; identified by sequence similarity; putative.
 
 
   0.407
Your Current Organism:
Thermotoga maritima
NCBI taxonomy Id: 243274
Other names: T. maritima MSB8, Thermotoga maritima DSM 3109, Thermotoga maritima MSB8, Thermotoga maritima str. MSB8, Thermotoga maritima strain MSB8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.