STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TM_1197Oligopeptide ABC transporter, permease protein; Similar to GB:Pyro_h percent identity: 62.46; identified by sequence similarity; putative. (291 aa)    
Predicted Functional Partners:
TM_1194
Oligopeptide ABC transporter, ATP-binding protein; Similar to GB:U08186 PID:473270 GB:AE000512 percent identity: 100.00; identified by sequence similarity; putative; Belongs to the ABC transporter superfamily.
   0.969
TM_1198
Oligopeptide ABC transporter, permease protein; Similar to GB:Pyro_h percent identity: 58.46; identified by sequence similarity; putative.
   0.968
TM_1196
Oligopeptide ABC transporter, ATP-binding protein; Similar to GB:Pyro_h percent identity: 66.04; identified by sequence similarity; putative; Belongs to the ABC transporter superfamily.
   0.958
TM_1199
Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein; Similar to PID:1652862 percent identity: 53.42; identified by sequence similarity; putative.
 
   0.920
TM_0074
Oligopeptide ABC transporter, ATP-binding protein; Similar to GB:U08186 PID:473270 GB:AE000512 percent identity: 81.32; identified by sequence similarity; putative; Belongs to the ABC transporter superfamily.
 
   0.915
TM_0303
Oligopeptide ABC transporter, ATP-binding protein; Similar to GB:U08186 PID:473270 GB:AE000512 percent identity: 76.00; identified by sequence similarity; putative; Belongs to the ABC transporter superfamily.
 
   0.904
TM_0030
Oligopeptide ABC transporter, permease protein; Similar to GB:Pyro_h percent identity: 68.01; identified by sequence similarity; putative.
 
   0.889
TM_0301
Oligopeptide ABC transporter, permease protein; Similar to GB:Pyro_h percent identity: 59.88; identified by sequence similarity; putative.
   0.884
TM_0072
Oligopeptide ABC transporter, permease protein; Similar to GB:AE000657 percent identity: 53.87; identified by sequence similarity; putative.
   0.882
TM_1222
Oligopeptide ABC transporter, permease protein; Similar to GB:Pyro_h percent identity: 79.57; identified by sequence similarity; putative.
 
   0.863
Your Current Organism:
Thermotoga maritima
NCBI taxonomy Id: 243274
Other names: T. maritima MSB8, Thermotoga maritima DSM 3109, Thermotoga maritima MSB8, Thermotoga maritima str. MSB8, Thermotoga maritima strain MSB8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.