STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TM_1225Conserved hypothetical protein; Similar to GB:Pyro_h percent identity: 52.69; identified by sequence similarity; putative. (326 aa)    
Predicted Functional Partners:
TM_1224
Transcriptional regulator, XylR-related; Similar to PID:1208894 SP:Q44406 percent identity: 54.86; identified by sequence similarity; putative.
       0.752
TM_1227
Endo-1,4-beta-mannosidase; Similar to PID:1679597 percent identity: 54.44; identified by sequence similarity; putative.
       0.684
TM_1226
Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein, putative; Similar to GB:Pyro_h percent identity: 57.09; identified by sequence similarity; putative.
       0.613
TM_1223
Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein; Similar to GB:Pyro_h percent identity: 59.08; identified by sequence similarity; putative.
       0.484
TM_1231
Alpha-mannosidase-related protein; Similar to SP:P21139 PID:205299 percent identity: 49.50; identified by sequence similarity; putative.
  
    0.467
Your Current Organism:
Thermotoga maritima
NCBI taxonomy Id: 243274
Other names: T. maritima MSB8, Thermotoga maritima DSM 3109, Thermotoga maritima MSB8, Thermotoga maritima str. MSB8, Thermotoga maritima strain MSB8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.