STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TM_1257Conserved hypothetical protein; Similar to GB:AE000657 percent identity: 58.61; identified by sequence similarity; putative. (611 aa)    
Predicted Functional Partners:
TM_1739
Hypothetical protein; Identified by sequence similarity; putative.
   
   0.832
aspC
Aspartate aminotransferase; Similar to PID:1255699 percent identity: 66.22; identified by sequence similarity; putative; Belongs to the class-I pyridoxal-phosphate-dependent aminotransferase family.
       0.783
TM_1256
ABC transporter, ATP-binding protein; Similar to GB:AL009126 percent identity: 61.40; identified by sequence similarity; putative.
       0.783
TM_0841
S-layer-like array protein; Similar to PID:993026 percent identity: 56.08; identified by sequence similarity; putative.
  
    0.672
TM_1254
Beta-phosphoglucomutase, putative; Displays high phosphatase activity toward erythrose 4- phosphate, fructose 6-phosphate, 2-deoxyglucose 6-phosphate, and mannose 6-phosphate. May have a role in the intracellular metabolism of many phosphorylated carbohydrates.
 
     0.594
TM_1317
astB/chuR-related protein; Similar to SP:Q02550 PID:143939 percent identity: 46.97; identified by sequence similarity; putative.
  
     0.470
TM_1060
Conserved hypothetical protein; Similar to GB:AE000782 percent identity: 49.74; identified by sequence similarity; putative.
  
     0.431
sbcD
Exonuclease, putative; SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as a 3'->5' double strand exonuclease that can open hairpins. It also has a 5' single-strand endonuclease activity; Belongs to the SbcD family.
 
     0.428
TM_0663
Conserved hypothetical protein; Similar to GB:Pyro_h percent identity: 59.49; identified by sequence similarity; putative.
  
     0.414
Your Current Organism:
Thermotoga maritima
NCBI taxonomy Id: 243274
Other names: T. maritima MSB8, Thermotoga maritima DSM 3109, Thermotoga maritima MSB8, Thermotoga maritima str. MSB8, Thermotoga maritima strain MSB8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.