STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TM_1265Conserved hypothetical protein; Similar to GB:L77117 PID:1500537 percent identity: 50.36; identified by sequence similarity; putative. (387 aa)    
Predicted Functional Partners:
TM_0638
Polysaccharide export protein, putative; Similar to PID:1107917 PID:1107923 percent identity: 49.47; identified by sequence similarity; putative.
  
     0.639
TM_0894
Conserved hypothetical protein; Similar to GB:L77117 SP:Q57744 PID:1591018 percent identity: 52.76; identified by sequence similarity; putative.
  
     0.544
TM_0806
Hypothetical protein; Identified by sequence similarity; putative.
  
     0.525
TM_1266
Hypothetical protein; Identified by sequence similarity; putative.
       0.506
TM_1267
thiH protein, putative; Similar to SP:P30140 PID:396329 PID:414236 GB:U00096 PID:1790423 percent identity: 53.87; identified by sequence similarity; putative.
       0.506
TM_1268
Hypothetical protein; Identified by sequence similarity; putative.
       0.506
TM_0182
Conserved hypothetical protein; Similar to GB:L77117 PID:1592124 percent identity: 64.76; identified by sequence similarity; putative.
  
     0.489
TM_1269
Biotin synthetase, putative; Required for the maturation of the [FeFe]-hydrogenase HydA (By similarity). Catalyzes the reductive cleavage of S-adenosyl-L- methionine (in vitro), suggesting it may contribute to the biosynthesis of an essential sulfur-containing ligand that binds to the hydrogenase active site [2Fe-2S] cluster. Belongs to the radical SAM superfamily. HydE family.
       0.483
TM_1264
Phosphate ABC transporter, periplasmic phosphate-binding protein; Similar to GB:AE000782 percent identity: 58.70; identified by sequence similarity; putative.
       0.476
TM_0616
Conserved hypothetical protein; Similar to GB:Pyro_h percent identity: 53.85; identified by sequence similarity; putative.
  
     0.429
Your Current Organism:
Thermotoga maritima
NCBI taxonomy Id: 243274
Other names: T. maritima MSB8, Thermotoga maritima DSM 3109, Thermotoga maritima MSB8, Thermotoga maritima str. MSB8, Thermotoga maritima strain MSB8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.