STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TM_1288Conserved hypothetical protein; Similar to GB:Pyro_h percent identity: 58.72; identified by sequence similarity; putative. (308 aa)    
Predicted Functional Partners:
obg
Conserved hypothetical protein; An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family.
 
 
    0.888
TM_1291
Iron-sulfur cluster-binding protein; Similar to GB:AE000782 percent identity: 66.14; identified by sequence similarity; putative.
 
     0.881
TM_1292
Iron-sulfur cluster-binding protein, putative; Similar to GB:AE000782 percent identity: 63.06; identified by sequence similarity; putative.
 
     0.880
TM_1290
Conserved hypothetical protein; Similar to GB:AE000666 percent identity: 63.96; identified by sequence similarity; putative.
 
     0.863
TM_1289
Ferredoxin; Similar to SP:P00211 percent identity: 66.00; identified by sequence similarity; putative.
 
     0.814
TM_1293
Conserved hypothetical protein; Similar to GB:L77117 SP:Q58523 PID:1499975 percent identity: 75.98; identified by sequence similarity; putative.
 
     0.667
pcm
L-isoaspartate(D-aspartate) O-methyltransferase; Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and/or degradation of damaged proteins.
   
    0.519
TM_0176
Conserved hypothetical protein; Similar to GB:AE000657 percent identity: 58.27; identified by sequence similarity; putative.
 
     0.431
TM_1679
Conserved hypothetical protein; Similar to GB:L77117 SP:Q57890 PID:1591152 percent identity: 58.19; identified by sequence similarity; putative.
 
     0.419
TM_1294
Conserved hypothetical protein; Similar to GB:AE000783 percent identity: 52.00; identified by sequence similarity; putative.
       0.411
Your Current Organism:
Thermotoga maritima
NCBI taxonomy Id: 243274
Other names: T. maritima MSB8, Thermotoga maritima DSM 3109, Thermotoga maritima MSB8, Thermotoga maritima str. MSB8, Thermotoga maritima strain MSB8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.