STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TM_1289Ferredoxin; Similar to SP:P00211 percent identity: 66.00; identified by sequence similarity; putative. (95 aa)    
Predicted Functional Partners:
TM_0201
NADP-reducing hydrogenase, subunit D, putative; Similar to GB:U07229 PID:466366 percent identity: 69.31; identified by sequence similarity; putative.
 
 0.960
TM_1425
Fe-hydrogenase, subunit beta; Similar to GP:2865516 percent identity: 100.00; identified by sequence similarity; putative.
    
 0.959
TM_1426
Fe-hydrogenase, subunit alpha; Similar to GP:2865517 percent identity: 100.00; identified by sequence similarity; putative.
 
 0.958
TM_0010
NADP-reducing hydrogenase, subunit C; Similar to GB:U07229 PID:466365 percent identity: 78.67; identified by sequence similarity; putative.
    
 0.953
TM_1288
Conserved hypothetical protein; Similar to GB:Pyro_h percent identity: 58.72; identified by sequence similarity; putative.
 
     0.808
TM_1291
Iron-sulfur cluster-binding protein; Similar to GB:AE000782 percent identity: 66.14; identified by sequence similarity; putative.
    
  0.790
TM_1292
Iron-sulfur cluster-binding protein, putative; Similar to GB:AE000782 percent identity: 63.06; identified by sequence similarity; putative.
    
  0.790
TM_1290
Conserved hypothetical protein; Similar to GB:AE000666 percent identity: 63.96; identified by sequence similarity; putative.
       0.773
TM_1421
Hydrogenase, putative; Similar to GB:X57838 PID:40828 percent identity: 52.17; identified by sequence similarity; putative.
 
 
 0.692
TM_0268
5-methyltetrahydrofolate S-homocysteine methyltransferase; Similar to GB:U00017 PID:466997 percent identity: 54.29; identified by sequence similarity; putative.
     
  0.591
Your Current Organism:
Thermotoga maritima
NCBI taxonomy Id: 243274
Other names: T. maritima MSB8, Thermotoga maritima DSM 3109, Thermotoga maritima MSB8, Thermotoga maritima str. MSB8, Thermotoga maritima strain MSB8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.