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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TM_1297Oxidoreductase, putative; Similar to SP:P54569 PID:1303983 GB:AL009126 percent identity: 55.83; identified by sequence similarity; putative. (285 aa)    
Predicted Functional Partners:
glpF
Glycerol uptake facilitator protein; Glycerol enters the cell via the glycerol diffusion facilitator protein. This membrane protein facilitates the movement of glycerol across the cytoplasmic membrane (By similarity).
   
 
 0.631
TM_1743
Oxidoreductase, aldo/keto reductase family; Similar to SP:P46905 PID:973332 PID:2415728 GB:AL009126 percent identity: 59.78; identified by sequence similarity; putative.
 
0.591
TM_1296
Ribonuclease H-related protein; Similar to SP:Q04740 PID:4357 PID:887615 percent identity: 54.01; identified by sequence similarity; putative.
       0.542
TM_1009
Oxidoreductase, aldo/keto reductase family; Similar to GB:AL009126 percent identity: 69.23; identified by sequence similarity; putative.
  
 0.445
Your Current Organism:
Thermotoga maritima
NCBI taxonomy Id: 243274
Other names: T. maritima MSB8, Thermotoga maritima DSM 3109, Thermotoga maritima MSB8, Thermotoga maritima str. MSB8, Thermotoga maritima strain MSB8
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