STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TM_1301astB/chuR-related protein; Similar to GB:U00096 PID:1742455 PID:1742459 PID:1787774 percent identity: 49.45; identified by sequence similarity; putative. (442 aa)    
Predicted Functional Partners:
TM_1303
Conserved hypothetical protein; Similar to GB:Pyro_h percent identity: 48.73; identified by sequence similarity; putative.
 
    0.869
TM_1304
Conserved hypothetical protein; Similar to GB:Pyro_h percent identity: 49.32; identified by sequence similarity; putative.
 
     0.860
TM_1302
ABC transporter, ATP-binding protein; Similar to GB:Pyro_h percent identity: 63.20; identified by sequence similarity; putative.
 
     0.827
TM_1306
Conserved hypothetical protein; Similar to GB:Pyro_h percent identity: 55.75; identified by sequence similarity; putative.
 
     0.622
TM_1305
Hypothetical protein; Identified by sequence similarity; putative.
       0.568
TM_1307
Hypothetical protein; Identified by sequence similarity; putative.
       0.543
TM_1317
astB/chuR-related protein; Similar to SP:Q02550 PID:143939 percent identity: 46.97; identified by sequence similarity; putative.
  
     0.492
TM_1300
Hypothetical protein; Identified by sequence similarity; putative.
       0.452
TM_1013
Hypothetical protein; Identified by sequence similarity; putative.
  
     0.441
TM_0031
Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein; Similar to GB:AE000511 PID:2314416 percent identity: 45.23; identified by sequence similarity; putative.
  
     0.413
Your Current Organism:
Thermotoga maritima
NCBI taxonomy Id: 243274
Other names: T. maritima MSB8, Thermotoga maritima DSM 3109, Thermotoga maritima MSB8, Thermotoga maritima str. MSB8, Thermotoga maritima strain MSB8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.