STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TM_1302ABC transporter, ATP-binding protein; Similar to GB:Pyro_h percent identity: 63.20; identified by sequence similarity; putative. (258 aa)    
Predicted Functional Partners:
TM_0765
ABC transporter, ATP-binding protein; Similar to GB:L77117 PID:1499865 percent identity: 61.42; identified by sequence similarity; putative.
 
    
0.927
TM_1304
Conserved hypothetical protein; Similar to GB:Pyro_h percent identity: 49.32; identified by sequence similarity; putative.
 
 
  0.923
TM_0483
ABC transporter, ATP-binding protein; Similar to GB:AE000782 percent identity: 66.35; identified by sequence similarity; putative.
 
  
 
0.916
TM_1303
Conserved hypothetical protein; Similar to GB:Pyro_h percent identity: 48.73; identified by sequence similarity; putative.
 
  
  0.916
TM_0421
Sugar ABC transporter, ATP-binding protein; Similar to GB:Pyro_h percent identity: 71.03; identified by sequence similarity; putative; Belongs to the ABC transporter superfamily.
 
  
 
0.915
potA
Spermidine/putrescine ABC transporter, ATP-binding protein; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Spermidine/putrescine importer (TC 3.A.1.11.1) family.
 
 
 
0.881
TM_1301
astB/chuR-related protein; Similar to GB:U00096 PID:1742455 PID:1742459 PID:1787774 percent identity: 49.45; identified by sequence similarity; putative.
 
     0.827
TM_1276
Sugar ABC transporter, ATP-binding protein; Similar to GB:AL009126 percent identity: 75.07; identified by sequence similarity; putative; Belongs to the ABC transporter superfamily.
 
   
 
0.762
TM_1306
Conserved hypothetical protein; Similar to GB:Pyro_h percent identity: 55.75; identified by sequence similarity; putative.
 
 
  0.757
TM_1138
Branched chain amino acid ABC transporter, ATP-binding protein; Similar to GB:D12589 SP:P30293 GB:X52093 PID:217074 percent identity: 74.02; identified by sequence similarity; putative.
  
 
0.753
Your Current Organism:
Thermotoga maritima
NCBI taxonomy Id: 243274
Other names: T. maritima MSB8, Thermotoga maritima DSM 3109, Thermotoga maritima MSB8, Thermotoga maritima str. MSB8, Thermotoga maritima strain MSB8
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.