STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TM_1307Hypothetical protein; Identified by sequence similarity; putative. (127 aa)    
Predicted Functional Partners:
TM_1309
Hypothetical protein; Identified by sequence similarity; putative.
      0.858
TM_1306
Conserved hypothetical protein; Similar to GB:Pyro_h percent identity: 55.75; identified by sequence similarity; putative.
       0.773
TM_1305
Hypothetical protein; Identified by sequence similarity; putative.
       0.737
TM_1302
ABC transporter, ATP-binding protein; Similar to GB:Pyro_h percent identity: 63.20; identified by sequence similarity; putative.
  
 
  0.667
TM_1303
Conserved hypothetical protein; Similar to GB:Pyro_h percent identity: 48.73; identified by sequence similarity; putative.
  
 
  0.616
TM_1308
Hypothetical protein; Identified by sequence similarity; putative.
       0.565
TM_1301
astB/chuR-related protein; Similar to GB:U00096 PID:1742455 PID:1742459 PID:1787774 percent identity: 49.45; identified by sequence similarity; putative.
       0.543
TM_1304
Conserved hypothetical protein; Similar to GB:Pyro_h percent identity: 49.32; identified by sequence similarity; putative.
       0.543
TM_1310
ABC transporter, ATP-binding protein; Similar to GP:2623774 percent identity: 50.79; identified by sequence similarity; putative.
       0.428
Your Current Organism:
Thermotoga maritima
NCBI taxonomy Id: 243274
Other names: T. maritima MSB8, Thermotoga maritima DSM 3109, Thermotoga maritima MSB8, Thermotoga maritima str. MSB8, Thermotoga maritima strain MSB8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.