STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TM_1330lacI family transcriptional regulator, putative; Similar to GB:L77117 PID:1590997 percent identity: 70.37; identified by sequence similarity; putative. (111 aa)    
Predicted Functional Partners:
TM_1331
Hypothetical protein; Identified by sequence similarity; putative.
       0.783
TM_0703
Competence-damage inducible protein, putative; Similar to GB:AL009126 percent identity: 61.61; identified by sequence similarity; putative; Belongs to the CinA family.
    
 0.729
TM_1328
ABC transporter, ATP-binding protein; Similar to GB:AL009126 percent identity: 53.42; identified by sequence similarity; putative.
 
     0.632
TM_0984
Hypothetical protein; Protects the bacterial cell from peptidases.
  
     0.631
TM_1317
astB/chuR-related protein; Similar to SP:Q02550 PID:143939 percent identity: 46.97; identified by sequence similarity; putative.
  
     0.617
TM_0756
Galactosyltransferase-related protein; Similar to GP:2198543 percent identity: 61.83; identified by sequence similarity; putative.
 
  
 0.579
TM_1319
ABC transporter, ATP-binding protein; Similar to GB:AL009126 percent identity: 52.55; identified by sequence similarity; putative.
  
     0.564
TM_0432
Sugar ABC transporter, periplasmic sugar-binding protein, putative; Similar to GB:M77351 SP:Q00749 PID:153737 percent identity: 55.25; identified by sequence similarity; putative.
  
     0.540
TM_1327
ABC transporter, ATP-binding protein; Similar to SP:P46903 PID:973330 PID:2415726 GB:AL009126 percent identity: 64.22; identified by sequence similarity; putative.
 
     0.535
nadE2
NH(3)-dependent NAD(+) synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source.
    
 0.512
Your Current Organism:
Thermotoga maritima
NCBI taxonomy Id: 243274
Other names: T. maritima MSB8, Thermotoga maritima DSM 3109, Thermotoga maritima MSB8, Thermotoga maritima str. MSB8, Thermotoga maritima strain MSB8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.