STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
potASpermidine/putrescine ABC transporter, ATP-binding protein; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Spermidine/putrescine importer (TC 3.A.1.11.1) family. (368 aa)    
Predicted Functional Partners:
TM_1375
Spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein; Similar to GB:M64519 SP:P23861 PID:147329 GB:U00096 PID:1651550 percent identity: 60.95; identified by sequence similarity; putative.
 
 0.999
TM_1377
Spermidine/putrescine ABC transporter, permease protein; Similar to GB:L42023 SP:P45170 PID:1007357 PID:1221478 PID:1205582 percent identity: 63.98; identified by sequence similarity; putative.
 0.999
TM_1378
Spermidine/putrescine ABC transporter, permease protein; Similar to GB:M64519 SP:P23859 PID:147328 GB:U00096 PID:1651551 percent identity: 71.19; identified by sequence similarity; putative.
 
 0.999
TM_1638
ABC transporter, ATP-binding protein; Similar to GB:AE000783 percent identity: 57.47; identified by sequence similarity; putative.
 
 
 
0.918
TM_0287
ABC transporter, ATP-binding protein; Similar to SP:P54718 PID:1486244 GB:AL009126 percent identity: 68.37; identified by sequence similarity; putative.
 
 
   
0.901
TM_0351
Conserved hypothetical protein; Similar to PID:1653948 percent identity: 57.68; identified by sequence similarity; putative.
 
 
    0.901
TM_0592
Amino acid ABC transporter, permease protein; Similar to GB:AE000782 percent identity: 72.86; identified by sequence similarity; putative.
 
 
 
 0.900
TM_1328
ABC transporter, ATP-binding protein; Similar to GB:AL009126 percent identity: 53.42; identified by sequence similarity; putative.
 
 
   
0.899
TM_1319
ABC transporter, ATP-binding protein; Similar to GB:AL009126 percent identity: 52.55; identified by sequence similarity; putative.
 
 
   
0.898
TM_0043
ABC transporter, ATP-binding protein; Similar to GB:AL009126 percent identity: 59.44; identified by sequence similarity; putative.
 
 
   
0.896
Your Current Organism:
Thermotoga maritima
NCBI taxonomy Id: 243274
Other names: T. maritima MSB8, Thermotoga maritima DSM 3109, Thermotoga maritima MSB8, Thermotoga maritima str. MSB8, Thermotoga maritima strain MSB8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.