STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TM_1403Antibiotic ABC transporter, ATP-binding protein, putative; Similar to GB:Pyro_h percent identity: 85.85; identified by sequence similarity; putative. (327 aa)    
Predicted Functional Partners:
TM_1404
Antibiotic ABC transporter, transmembrane protein, putative; Similar to GB:AE000782 percent identity: 77.87; identified by sequence similarity; putative.
 
  0.967
TM_1137
Branched chain amino acid ABC transporter, permease protein; Similar to GB:D90223 SP:P21628 GB:M64046 PID:216865 percent identity: 62.72; identified by sequence similarity; putative; Belongs to the binding-protein-dependent transport system permease family.
   
  0.905
TM_0351
Conserved hypothetical protein; Similar to PID:1653948 percent identity: 57.68; identified by sequence similarity; putative.
 
    
 0.819
TM_0387
Conserved hypothetical protein; Similar to PID:1707843 percent identity: 55.56; identified by sequence similarity; putative.
 
 
  0.758
TM_1029
ABC transporter, permease protein, putative; Similar to SP:P42333 percent identity: 50.27; identified by sequence similarity; putative.
  
 0.734
TM_0303
Oligopeptide ABC transporter, ATP-binding protein; Similar to GB:U08186 PID:473270 GB:AE000512 percent identity: 76.00; identified by sequence similarity; putative; Belongs to the ABC transporter superfamily.
 
   
 
0.667
TM_1220
Oligopeptide ABC transporter, ATP-binding protein; Similar to GB:Pyro_h percent identity: 79.13; identified by sequence similarity; putative; Belongs to the ABC transporter superfamily.
 
  
 
0.663
TM_0592
Amino acid ABC transporter, permease protein; Similar to GB:AE000782 percent identity: 72.86; identified by sequence similarity; putative.
   
  0.655
TM_0764
Hypothetical protein; Identified by sequence similarity; putative.
  
 0.564
TM_1405
Lipopolysaccharide biosynthesis protein-related protein; Similar to GB:L77117 PID:1500505 percent identity: 53.74; identified by sequence similarity; putative.
  
   0.558
Your Current Organism:
Thermotoga maritima
NCBI taxonomy Id: 243274
Other names: T. maritima MSB8, Thermotoga maritima DSM 3109, Thermotoga maritima MSB8, Thermotoga maritima str. MSB8, Thermotoga maritima strain MSB8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.