STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TM_1416Conserved hypothetical protein; Similar to GB:Pyro_h percent identity: 70.62; identified by sequence similarity; putative. (318 aa)    
Predicted Functional Partners:
TM_1417
ABC transporter, ATP-binding protein; Similar to GB:L77117 SP:Q60350 PID:1590838 percent identity: 75.00; identified by sequence similarity; putative.
 
 0.999
TM_1368
ABC transporter, ATP-binding protein; Similar to GB:Pyro_h percent identity: 70.83; identified by sequence similarity; putative.
 
 0.985
TM_1370
Hypothetical protein; Identified by sequence similarity; putative.
  
  
  0.913
TM_1369
Conserved hypothetical protein; Similar to GB:AL009126 percent identity: 74.45; identified by sequence similarity; putative.
  
  
 
0.906
csd
Aminotransferase, class V; Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine.
  
 
 0.741
iscU
Nitrogen fixation protein NifU-related protein; A scaffold on which IscS assembles Fe-S clusters. Subsequently gives the nascent cluster to other proteins. It is likely that Fe-S cluster coordination is flexible as the role of this complex is to build and then hand off Fe-S clusters (By similarity). Belongs to the NifU family.
  
  
 0.698
TM_1601
Conserved hypothetical protein; Similar to GB:Pyro_h percent identity: 62.14; identified by sequence similarity; putative.
  
     0.509
bfrA
Beta-fructosidase; Hydrolysis of sucrose, raffinose, inulin and levan. Specific for the fructose moiety and the beta-anomeric configuration of the glycosidic linkages of its substrates. The enzyme released fructose from sucrose and raffinose, and the fructose polymer inulin is hydrolyzed quantitatively in an exo-type fashion.
     
 0.486
suhB
Inositol monophosphatase family protein, putative; Phosphatase with broad specificity; it can dephosphorylate fructose 1,6-bisphosphate, both D and L isomers of inositol-1-phosphate (I-1-P) but displaying a 20-fold higher rate of hydrolysis of D-I-1-P than of the L isomer, 2'-AMP, pNPP, inositol-2-phosphate, beta-glycerol phosphate, and alpha-D-glucose-1-phosphate. Cannot hydrolyze glucose-6- phosphate, fructose-6-phosphate, 5'-AMP and NAD(+). May be involved in the biosynthesis of a unique osmolyte, di-myo-inositol 1,1-phosphate.
  
    0.456
TM_1021
Permease, putative; Similar to GP:2695718 percent identity: 100.00; identified by sequence similarity; putative.
  
     0.400
Your Current Organism:
Thermotoga maritima
NCBI taxonomy Id: 243274
Other names: T. maritima MSB8, Thermotoga maritima DSM 3109, Thermotoga maritima MSB8, Thermotoga maritima str. MSB8, Thermotoga maritima strain MSB8
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