STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TM_1527Conserved hypothetical protein; Similar to GB:AE000657 percent identity: 54.92; identified by sequence similarity; putative. (140 aa)    
Predicted Functional Partners:
TM_1692
Aminotransferase, class V; Similar to SP:P12623 PID:142037 percent identity: 62.03; identified by sequence similarity; putative.
  
 
 0.792
menA
1,4-dihydroxy-2-naphthoate octaprenyltransferase, putative; Conversion of 1,4-dihydroxy-2-naphthoate (DHNA) to demethylmenaquinone (DMK); Belongs to the MenA family. Type 1 subfamily.
  
    0.589
TM_1529
Hypothetical protein; Identified by sequence similarity; putative.
       0.581
iscU
Nitrogen fixation protein NifU-related protein; A scaffold on which IscS assembles Fe-S clusters. Subsequently gives the nascent cluster to other proteins. It is likely that Fe-S cluster coordination is flexible as the role of this complex is to build and then hand off Fe-S clusters (By similarity). Belongs to the NifU family.
  
  
 0.561
TM_1531
Electron transfer flavoprotein, alpha subunit; Similar to PID:1055221 SP:P52039 percent identity: 68.15; identified by sequence similarity; putative.
       0.418
TM_1530
Electron transfer flavoprotein, beta subunit; Similar to PID:1055220 SP:P52040 percent identity: 66.53; identified by sequence similarity; putative.
       0.417
TM_1535
Octoprenyl-diphosphate synthase, putative; Similar to GB:AE000657 percent identity: 62.05; identified by sequence similarity; putative; Belongs to the FPP/GGPP synthase family.
  
  
 0.405
Your Current Organism:
Thermotoga maritima
NCBI taxonomy Id: 243274
Other names: T. maritima MSB8, Thermotoga maritima DSM 3109, Thermotoga maritima MSB8, Thermotoga maritima str. MSB8, Thermotoga maritima strain MSB8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.