STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TM_1535Octoprenyl-diphosphate synthase, putative; Similar to GB:AE000657 percent identity: 62.05; identified by sequence similarity; putative; Belongs to the FPP/GGPP synthase family. (299 aa)    
Predicted Functional Partners:
uppS
Conserved hypothetical protein; Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids.
 
 
 0.995
TM_0161
Geranyltranstransferase; Similar to GB:D13293 SP:Q08291 GB:S72629 GB:S72630 GB:S72633 percent identity: 62.08; identified by sequence similarity; putative; Belongs to the FPP/GGPP synthase family.
  
  
 
0.993
TM_1555
Hypothetical protein; Identified by sequence similarity; putative.
  
 
 0.992
menA
1,4-dihydroxy-2-naphthoate octaprenyltransferase, putative; Conversion of 1,4-dihydroxy-2-naphthoate (DHNA) to demethylmenaquinone (DMK); Belongs to the MenA family. Type 1 subfamily.
 
  
 0.977
TM_1532
fixC protein; Similar to SP:P26484 GB:X55450 PID:38698 percent identity: 66.82; identified by sequence similarity; putative.
  
 0.859
TM_1533
Ferredoxin; Similar to GB:X65515 PID:510488 SP:P53658 percent identity: 68.82; identified by sequence similarity; putative.
     
 0.792
TM_1536
Conserved hypothetical protein; Similar to GB:AE000782 percent identity: 52.12; identified by sequence similarity; putative.
       0.788
TM_1534
Hypothetical protein; Identified by sequence similarity; putative.
       0.786
TM_1530
Electron transfer flavoprotein, beta subunit; Similar to PID:1055220 SP:P52040 percent identity: 66.53; identified by sequence similarity; putative.
  
    0.783
TM_1531
Electron transfer flavoprotein, alpha subunit; Similar to PID:1055221 SP:P52039 percent identity: 68.15; identified by sequence similarity; putative.
       0.775
Your Current Organism:
Thermotoga maritima
NCBI taxonomy Id: 243274
Other names: T. maritima MSB8, Thermotoga maritima DSM 3109, Thermotoga maritima MSB8, Thermotoga maritima str. MSB8, Thermotoga maritima strain MSB8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.