STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TM_1538Hypothetical protein; Identified by sequence similarity; putative. (89 aa)    
Predicted Functional Partners:
flgI
Flagellar P-ring protein; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation.
       0.811
TM_1541
Flagellar protein FlgA, putative; Similar to PID:1086562 percent identity: 47.97; identified by sequence similarity; putative.
       0.810
flgH
Flagellar L-ring protein; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation.
       0.809
TM_1542
Flagellar basal-body rod protein FlgG; Similar to GB:AE000657 percent identity: 75.19; identified by sequence similarity; putative.
       0.780
TM_1543
Flagellar basal-body rod protein FlgF; Similar to SP:Q06171 GB:S52478 PID:262652 percent identity: 56.14; identified by sequence similarity; putative.
       0.740
TM_1544
Rod shape-determining protein MreB; Similar to SP:P32444 GB:X62374 PID:49005 percent identity: 74.61; identified by sequence similarity; putative.
       0.740
TM_1546
Single stranded DNA-specific exonuclease, putative; Similar to GB:AL009126 percent identity: 59.14; identified by sequence similarity; putative.
       0.483
TM_1545
Conserved hypothetical protein; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF nuclease family.
       0.476
Your Current Organism:
Thermotoga maritima
NCBI taxonomy Id: 243274
Other names: T. maritima MSB8, Thermotoga maritima DSM 3109, Thermotoga maritima MSB8, Thermotoga maritima str. MSB8, Thermotoga maritima strain MSB8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.