STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TM_1548Lipopolysaccharide biosynthesis protein; Similar to GP:1773343 percent identity: 61.19; identified by sequence similarity; putative. (605 aa)    
Predicted Functional Partners:
TM_0572
Lipopolysaccharide biosynthesis protein, putative; Similar to PID:1653135 percent identity: 63.91; identified by sequence similarity; putative; Belongs to the DegT/DnrJ/EryC1 family.
 
 0.952
TM_0644
Hypothetical protein; Identified by sequence similarity; putative.
 
 
 0.949
TM_0668
Pleiotropic regulatory protein; Similar to GB:M29002 SP:P15263 PID:142840 percent identity: 74.53; identified by sequence similarity; putative; Belongs to the DegT/DnrJ/EryC1 family.
 
 0.938
wecA
Methicillin resistance protein; Catalyzes the transfer of the GlcNAc-1-phosphate moiety from UDP-GlcNAc onto the carrier lipid undecaprenyl phosphate (C55-P), yielding GlcNAc-pyrophosphoryl-undecaprenyl (GlcNAc-PP-C55), the lipid intermediate involved in the synthesis of various bacterial cell envelope components. The enzyme is highly active when tested with C35- P, instead of its natural C55-P lipid substrate, suggesting that at least a 35-carbon chain is required for the lipid to be a substrate of WecA; Belongs to the glycosyltransferase 4 family. WecA subfamily.
    
 0.880
TM_0632
Extracellular polysaccharide biosynthesis-related protein; Similar to GB:U00096 SP:P71241 PID:1407618 PID:1736749 PID:1736753 percent identity: 62.22; identified by sequence similarity; putative.
 
 0.871
TM_0756
Galactosyltransferase-related protein; Similar to GP:2198543 percent identity: 61.83; identified by sequence similarity; putative.
  
  
 0.836
TM_0638
Polysaccharide export protein, putative; Similar to PID:1107917 PID:1107923 percent identity: 49.47; identified by sequence similarity; putative.
  
 
 0.828
TM_1547
Conserved hypothetical protein; Similar to GB:Pyro_h percent identity: 58.04; identified by sequence similarity; putative.
       0.824
flgI
Flagellar P-ring protein; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation.
  
  
 0.788
flgH
Flagellar L-ring protein; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation.
  
    0.761
Your Current Organism:
Thermotoga maritima
NCBI taxonomy Id: 243274
Other names: T. maritima MSB8, Thermotoga maritima DSM 3109, Thermotoga maritima MSB8, Thermotoga maritima str. MSB8, Thermotoga maritima strain MSB8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.