Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TM_1586Hypothetical protein; Identified by sequence similarity; putative. (206 aa)    
Predicted Functional Partners:
TM_1585
Glycerate kinase, putative; Involved in the degradation of serine via 3-hydroxypyruvate. Catalyzes the ATP-dependent phosphorylation of D-glycerate to 2- phosphoglycerate.
  
    0.817
TM_1587
Hypothetical protein; Identified by sequence similarity; putative.
       0.568
TM_1588
Conserved hypothetical protein, GGDEF domain; Similar to GB:AE000657 percent identity: 57.07; identified by sequence similarity; putative.
       0.568
TM_1306
Conserved hypothetical protein; Similar to GB:Pyro_h percent identity: 55.75; identified by sequence similarity; putative.
 
    0.462
TM_1304
Conserved hypothetical protein; Similar to GB:Pyro_h percent identity: 49.32; identified by sequence similarity; putative.
 
    0.445
TM_0268
5-methyltetrahydrofolate S-homocysteine methyltransferase; Similar to GB:U00017 PID:466997 percent identity: 54.29; identified by sequence similarity; putative.
  
  
 0.423
TM_0564
Conserved hypothetical protein; Similar to PID:1001492 PID:1001553 percent identity: 47.33; identified by sequence similarity; putative.
 
 
 0.403
Your Current Organism:
Thermotoga maritima
NCBI taxonomy Id: 243274
Other names: T. maritima MSB8, Thermotoga maritima DSM 3109, Thermotoga maritima MSB8, Thermotoga maritima str. MSB8, Thermotoga maritima strain MSB8
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