STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TM_1588Conserved hypothetical protein, GGDEF domain; Similar to GB:AE000657 percent identity: 57.07; identified by sequence similarity; putative. (240 aa)    
Predicted Functional Partners:
TM_1587
Hypothetical protein; Identified by sequence similarity; putative.
   
   0.786
TM_1830
Conserved hypothetical protein; Similar to GB:AE000657 percent identity: 71.11; identified by sequence similarity; putative.
  
     0.774
TM_1678
Conserved hypothetical protein; Similar to PID:558266 percent identity: 65.15; identified by sequence similarity; putative.
 
   0.603
TM_0186
Response regulator; Phosphodiesterase (PDE) that catalyzes the hydrolysis of cyclic diguanylate (c-di-GMP) to GMP. Hydrolyzes c-di-GMP to GMP in a two-step reaction, via the linear intermediate 5'- phosphoguanylyl(3'->5')guanosine (pGpG).
 
  
 0.591
TM_1467
Conserved hypothetical protein; Similar to PID:558266 percent identity: 64.17; identified by sequence similarity; putative.
 
   0.579
TM_1585
Glycerate kinase, putative; Involved in the degradation of serine via 3-hydroxypyruvate. Catalyzes the ATP-dependent phosphorylation of D-glycerate to 2- phosphoglycerate.
       0.568
TM_1586
Hypothetical protein; Identified by sequence similarity; putative.
       0.568
TM_1147
Conserved hypothetical protein; Similar to PID:558266 percent identity: 58.48; identified by sequence similarity; putative.
 
  
 0.523
TM_0854
Hypothetical protein; Identified by sequence similarity; putative.
 
      0.502
TM_1145
Conserved hypothetical protein; Similar to PID:558266 percent identity: 56.47; identified by sequence similarity; putative.
 
   0.495
Your Current Organism:
Thermotoga maritima
NCBI taxonomy Id: 243274
Other names: T. maritima MSB8, Thermotoga maritima DSM 3109, Thermotoga maritima MSB8, Thermotoga maritima str. MSB8, Thermotoga maritima strain MSB8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.