STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TM_1594Conserved hypothetical protein, GGDEF domain; Similar to GB:AE000657 percent identity: 60.77; identified by sequence similarity; putative. (1206 aa)    
Predicted Functional Partners:
TM_1595
Conserved hypothetical protein; Similar to GB:AE000657 percent identity: 58.22; identified by sequence similarity; putative.
       0.810
TM_1596
Purine nucleoside phosphorylase; The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate.
       0.785
TM_1170
ABC transporter, periplasmic substrate-binding protein/conserved hypothetical protein; Similar to GB:U00096 SP:P39174 PID:1736579 PID:1736587 PID:1788228 percent identity: 46.34; identified by sequence similarity; putative.
 
 0.582
TM_1184
pleD-related protein; Similar to PID:1652841 percent identity: 50.78; identified by sequence similarity; putative.
 
 
0.575
TM_1597
Hypothetical protein; Catalyzes the interconversion of D-lysine and L-lysine. Has also high activity toward ornithine, and weaker activity toward alanine. Contributes to production of D-lysine and D-alanine for use as peptidoglycan components.
       0.560
TM_1598
RNA polymerase sigma-E factor; Similar to SP:P34086 PID:1045628 PID:987648 GB:U00096 PID:1788926 percent identity: 61.67; identified by sequence similarity; putative; Belongs to the sigma-70 factor family. ECF subfamily.
   
   0.529
TM_1147
Conserved hypothetical protein; Similar to PID:558266 percent identity: 58.48; identified by sequence similarity; putative.
  
 
  0.511
TM_1145
Conserved hypothetical protein; Similar to PID:558266 percent identity: 56.47; identified by sequence similarity; putative.
  
  0.488
TM_1599
Hypothetical protein; Identified by sequence similarity; putative.
       0.488
TM_1600
Hypothetical protein; Identified by sequence similarity; putative.
       0.488
Your Current Organism:
Thermotoga maritima
NCBI taxonomy Id: 243274
Other names: T. maritima MSB8, Thermotoga maritima DSM 3109, Thermotoga maritima MSB8, Thermotoga maritima str. MSB8, Thermotoga maritima strain MSB8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.