STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TM_1650Alpha-amylase, putative; Similar to SP:P14898 PID:2691 percent identity: 52.11; identified by sequence similarity; putative. (422 aa)    
Predicted Functional Partners:
pulA
Pullulanase; Similar to GP:2815006 percent identity: 100.00; identified by sequence similarity; putative.
 
 0.998
mgtA
4-alpha-glucanotransferase; Similar to GP:951311 percent identity: 99.77; identified by sequence similarity; putative; Belongs to the glycosyl hydrolase 13 family.
  
  
0.994
aglB
Cyclomaltodextrinase, putative; Is able to hydrolyze various linear maltooligosaccharides (maltotriose to maltoheptaose) and cyclomaltodextrins (CDs), to mainly glucose and maltose, by liberating glucose from the reducing end of the molecules. Shows a very weak activity on starch. Can neither hydrolyze maltose nor degrade pullulan, but rapidly hydrolyzes acarbose, a strong amylase and glucosidase inhibitor, to acarviosine and glucose. Belongs to the glycosyl hydrolase 13 family.
 
  
0.994
TM_1840
Alpha-amylase; Similar to PID:1850901 GB:AE000512 percent identity: 100.00; identified by sequence similarity; putative.
 
  
 
0.937
TM_1651
Translation elongation factor G; Similar to GB:AE000657 percent identity: 66.37; identified by sequence similarity; putative; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-G/EF-2 subfamily.
   
  0.839
TM_1653
Pyrimidine-nucleoside phosphorylase; Similar to SP:P77836 PID:1620901 PID:1638805 percent identity: 74.48; identified by sequence similarity; putative.
  
    0.813
TM_1654
Sensor histidine kinase HpkA; Similar to PID:1575578 GB:AE000512 percent identity: 100.00; identified by sequence similarity; putative.
     
 0.812
TM_1652
Hypothetical protein; Identified by sequence similarity; putative.
       0.810
TM_1655
Response regulator DrrA; Similar to PID:1575577 GB:AE000512 percent identity: 100.00; identified by sequence similarity; putative.
       0.810
TM_1648
Conserved hypothetical protein; Similar to SP:P54456 PID:1303792 GB:AL009126 percent identity: 57.92; identified by sequence similarity; putative.
       0.747
Your Current Organism:
Thermotoga maritima
NCBI taxonomy Id: 243274
Other names: T. maritima MSB8, Thermotoga maritima DSM 3109, Thermotoga maritima MSB8, Thermotoga maritima str. MSB8, Thermotoga maritima strain MSB8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.