STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TM_1655Response regulator DrrA; Similar to PID:1575577 GB:AE000512 percent identity: 100.00; identified by sequence similarity; putative. (247 aa)    
Predicted Functional Partners:
TM_1654
Sensor histidine kinase HpkA; Similar to PID:1575578 GB:AE000512 percent identity: 100.00; identified by sequence similarity; putative.
 0.998
TM_0853
Sensor histidine kinase; Similar to PID:1575578 GB:AE000512 percent identity: 61.11; identified by sequence similarity; putative.
 0.964
TM_0400
Sensor histidine kinase; Similar to PID:1001613 PID:1001628 percent identity: 54.23; identified by sequence similarity; putative.
 0.944
TM_1258
Sensor histidine kinase, PhoR-related; Similar to GB:M23549 SP:P23545 PID:143331 PID:2293271 GB:AL009126 percent identity: 56.96; identified by sequence similarity; putative.
 
 0.888
TM_1788
Conserved hypothetical protein, GGDEF domain; Similar to GB:AE000657 percent identity: 60.13; identified by sequence similarity; putative.
 
 
 
  0.877
TM_1652
Hypothetical protein; Identified by sequence similarity; putative.
       0.827
TM_1653
Pyrimidine-nucleoside phosphorylase; Similar to SP:P77836 PID:1620901 PID:1638805 percent identity: 74.48; identified by sequence similarity; putative.
       0.827
TM_1651
Translation elongation factor G; Similar to GB:AE000657 percent identity: 66.37; identified by sequence similarity; putative; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-G/EF-2 subfamily.
     
 0.823
TM_1650
Alpha-amylase, putative; Similar to SP:P14898 PID:2691 percent identity: 52.11; identified by sequence similarity; putative.
       0.810
TM_0972
Conserved hypothetical protein, GGDEF domain; Similar to GB:AE000657 percent identity: 63.80; identified by sequence similarity; putative.
 
 
 
  0.784
Your Current Organism:
Thermotoga maritima
NCBI taxonomy Id: 243274
Other names: T. maritima MSB8, Thermotoga maritima DSM 3109, Thermotoga maritima MSB8, Thermotoga maritima str. MSB8, Thermotoga maritima strain MSB8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.