STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
xylAXylose isomerase; Similar to SP:P45687 PID:625180 percent identity: 71.21; identified by sequence similarity; putative; Belongs to the xylose isomerase family. (444 aa)    
Predicted Functional Partners:
xylB
Sugar kinase, FGGY family; Similar to SP:P27155 PID:48836 percent identity: 59.50; identified by sequence similarity; putative.
 
 
 0.998
TM_0284
Sugar kinase, FGGY family; Similar to GB:AL009126 percent identity: 54.42; identified by sequence similarity; putative; Belongs to the FGGY kinase family.
 
 
 0.991
TM_0296
Fructokinase; Similar to PID:1052973 percent identity: 57.14; identified by sequence similarity; putative.
    
 0.991
glk
Glucokinase; Catalyzes the phosphorylation of D-glucose to D-glucose 6- phosphate using ATP as the phosphate donor. Can also phosphorylate 2- deoxyglucose, with lower efficiency. ITP can also serve as a phosphoryl donor.
    
 0.931
lacZ
Beta-galactosidase; Similar to GB:U08186 PID:473272 GB:AE000512 percent identity: 99.61; identified by sequence similarity; putative.
    
 0.888
TM_1668
Conserved hypothetical protein; Similar to GB:AE000783 percent identity: 57.94; identified by sequence similarity; putative.
       0.810
TM_0032
Transcriptional regulator, XylR-related; Similar to PID:1208894 SP:Q44406 percent identity: 51.23; identified by sequence similarity; putative.
    
 0.654
TM_1665
Hypothetical protein; Identified by sequence similarity; putative.
  
    0.564
def
Polypeptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions (By similarity).
       0.563
surE
Stationary phase survival protein; Nucleotidase that preferentially dephosphorylates 5'-GMP and 5'-AMP.
       0.563
Your Current Organism:
Thermotoga maritima
NCBI taxonomy Id: 243274
Other names: T. maritima MSB8, Thermotoga maritima DSM 3109, Thermotoga maritima MSB8, Thermotoga maritima str. MSB8, Thermotoga maritima strain MSB8
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.