STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TM_1699Conserved hypothetical protein; Similar to PID:558266 percent identity: 62.23; identified by sequence similarity; putative. (558 aa)    
Predicted Functional Partners:
TM_0972
Conserved hypothetical protein, GGDEF domain; Similar to GB:AE000657 percent identity: 63.80; identified by sequence similarity; putative.
 
   0.861
TM_1788
Conserved hypothetical protein, GGDEF domain; Similar to GB:AE000657 percent identity: 60.13; identified by sequence similarity; putative.
 
   0.838
TM_1695
Conserved hypothetical protein; Similar to GB:AE000666 percent identity: 53.37; identified by sequence similarity; putative.
       0.773
TM_1696
Type IV prepilin peptidase; Similar to GB:AE000657 percent identity: 61.90; identified by sequence similarity; putative.
       0.773
TM_1697
Conserved hypothetical protein; Similar to GB:AE000657 percent identity: 64.88; identified by sequence similarity; putative.
       0.773
TM_1698
Aspartate aminotransferase; Similar to PID:1255699 percent identity: 53.25; identified by sequence similarity; putative.
       0.773
TM_1692
Aminotransferase, class V; Similar to SP:P12623 PID:142037 percent identity: 62.03; identified by sequence similarity; putative.
       0.545
TM_1693
1-acyl-sn-glycerol-3-phosphate acetyltransferase, putative; Similar to GB:L32861 PID:520780 GB:AE000783 percent identity: 57.75; identified by sequence similarity; putative; Belongs to the 1-acyl-sn-glycerol-3-phosphate acyltransferase family.
       0.545
thiI
Thiamin biosynthesis protein ThiI; Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS.
       0.545
TM_1691
Conserved hypothetical protein; Similar to GB:AE000783 percent identity: 53.26; identified by sequence similarity; putative.
       0.477
Your Current Organism:
Thermotoga maritima
NCBI taxonomy Id: 243274
Other names: T. maritima MSB8, Thermotoga maritima DSM 3109, Thermotoga maritima MSB8, Thermotoga maritima str. MSB8, Thermotoga maritima strain MSB8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.