STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TM_1716Hypothetical protein; Identified by sequence similarity; putative. (204 aa)    
Predicted Functional Partners:
rsgA
Conserved hypothetical protein; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit; Belongs to the TRAFAC class YlqF/YawG GTPase family. RsgA subfamily.
  
  
 0.870
TM_0643
Clostripain-related protein; Similar to SP:P09870 PID:40528 percent identity: 49.04; identified by sequence similarity; putative.
   
 
 0.824
TM_1589
Clostripain-related protein; Similar to SP:P09870 PID:40528 percent identity: 50.27; identified by sequence similarity; putative.
   
 
 0.824
rlmN
Conserved hypothetical protein; Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs; Belongs to the radical SAM superfamily. RlmN family.
  
  
 0.824
TM_1718
Ribulose-phosphate 3-epimerase; Similar to GB:L77117 SP:Q58093 PID:1591395 percent identity: 66.36; identified by sequence similarity; putative; Belongs to the ribulose-phosphate 3-epimerase family.
  
  
 0.819
murB
UDP-N-acetylenolpyruvoylglucosamine reductase; Cell wall formation.
     
 0.597
TM_1713
Proline dipeptidase, putative; Similar to GB:AE000783 percent identity: 59.24; identified by sequence similarity; putative.
       0.580
TM_1711
Hypothetical protein; Identified by sequence similarity; putative.
       0.530
TM_1712
Hypothetical protein; Identified by sequence similarity; putative.
       0.530
ftsZ
Cell division protein FtsZ; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity.
  
  
 0.425
Your Current Organism:
Thermotoga maritima
NCBI taxonomy Id: 243274
Other names: T. maritima MSB8, Thermotoga maritima DSM 3109, Thermotoga maritima MSB8, Thermotoga maritima str. MSB8, Thermotoga maritima strain MSB8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.