STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TM_1718Ribulose-phosphate 3-epimerase; Similar to GB:L77117 SP:Q58093 PID:1591395 percent identity: 66.36; identified by sequence similarity; putative; Belongs to the ribulose-phosphate 3-epimerase family. (220 aa)    
Predicted Functional Partners:
TM_1762
Transketolase, putative; Similar to GP:452486 percent identity: 53.52; identified by sequence similarity; putative.
 0.999
TM_0438
6-phosphogluconate dehydrogenase, decarboxylating; Catalyzes the oxidative decarboxylation of 6-phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH.
   
 0.995
TM_1080
Sugar-phosphate isomerase; Similar to GB:AE000657 percent identity: 77.62; identified by sequence similarity; putative.
 
 
 0.995
xylB
Sugar kinase, FGGY family; Similar to SP:P27155 PID:48836 percent identity: 59.50; identified by sequence similarity; putative.
 
  
 0.994
TM_0284
Sugar kinase, FGGY family; Similar to GB:AL009126 percent identity: 54.42; identified by sequence similarity; putative; Belongs to the FGGY kinase family.
 
  
 0.993
TM_0283
Sugar isomerase; Similar to GB:U14003 SP:P39306 PID:537039 GB:U00096 PID:1790642 percent identity: 60.75; identified by sequence similarity; putative.
     
 0.992
rsgA
Conserved hypothetical protein; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit; Belongs to the TRAFAC class YlqF/YawG GTPase family. RsgA subfamily.
 
    0.981
TM_0067
2-keto-3-deoxygluconate kinase; Similar to PID:1146189 SP:P50845 GB:AL009126 percent identity: 47.39; identified by sequence similarity; putative.
  
 0.951
rlmN
Conserved hypothetical protein; Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs; Belongs to the radical SAM superfamily. RlmN family.
  
    0.831
TM_1716
Hypothetical protein; Identified by sequence similarity; putative.
  
  
 0.819
Your Current Organism:
Thermotoga maritima
NCBI taxonomy Id: 243274
Other names: T. maritima MSB8, Thermotoga maritima DSM 3109, Thermotoga maritima MSB8, Thermotoga maritima str. MSB8, Thermotoga maritima strain MSB8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.