STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TM_1772Conserved hypothetical protein; Similar to GB:AL009126 percent identity: 60.53; identified by sequence similarity; putative. (497 aa)    
Predicted Functional Partners:
TM_1468
Conserved hypothetical protein; Binds long-chain fatty acids, such as palmitate, and may play a role in lipid transport or fatty acid metabolism.
   0.993
TM_1608
Conserved hypothetical protein; May bind long-chain fatty acids, such as palmitate, and may play a role in lipid transport or fatty acid metabolism.
 
   0.940
TM_1773
Conserved hypothetical protein; Similar to GB:L77117 SP:Q58741 PID:1591987 percent identity: 54.39; identified by sequence similarity; putative.
       0.810
apgM
Phosphonopyruvate decarboxylase, putative; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate.
       0.810
TM_1775
Hypothetical protein; Identified by sequence similarity; putative.
       0.810
TM_1771
Conserved hypothetical protein; Similar to GB:AL009126 percent identity: 51.35; identified by sequence similarity; putative.
 
  
 0.798
TM_1764
Conserved hypothetical protein; Similar to PID:727436 percent identity: 58.82; identified by sequence similarity; putative.
  
  
 0.702
dxs
1-deoxyxylulose-5-phosphate synthase; Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D- xylulose-5-phosphate (DXP); Belongs to the transketolase family. DXPS subfamily.
       0.633
xseA
Exodeoxyribonuclease VII, large subunit; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseA family.
       0.624
polC
DNA polymerase III, alpha subunit; Required for replicative DNA synthesis. This DNA polymerase also exhibits 3' to 5' exonuclease activity.
 
     0.598
Your Current Organism:
Thermotoga maritima
NCBI taxonomy Id: 243274
Other names: T. maritima MSB8, Thermotoga maritima DSM 3109, Thermotoga maritima MSB8, Thermotoga maritima str. MSB8, Thermotoga maritima strain MSB8
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