STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TM_1794Conserved hypothetical protein; Similar to GB:AE000782 percent identity: 51.61; identified by sequence similarity; putative. (815 aa)    
Predicted Functional Partners:
TM_1793
Hypothetical protein; Identified by sequence similarity; putative.
 
 
 
 0.991
TM_1792
Conserved hypothetical protein; Similar to GB:AE000782 percent identity: 58.82; identified by sequence similarity; putative.
 
 
 
 0.990
TM_1791
Conserved hypothetical protein; Similar to GB:AE000782 percent identity: 57.26; identified by sequence similarity; putative.
 
 
 
 0.978
cas1
Conserved hypothetical protein; CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain sequences complementary to antecedent mobile elements and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Acts as a dsDNA endonuclease. Involved in the integration of spacer DNA into the CRISPR cassette (By similarity).
 
  
 0.875
TM_1810
Hypothetical protein; Identified by sequence similarity; putative.
  
 
 0.873
TM_1809
Conserved hypothetical protein; Similar to GB:Pyro_h percent identity: 65.18; identified by sequence similarity; putative.
  
 
 0.861
TM_1795
Hypothetical protein; Identified by sequence similarity; putative.
   
 
 0.856
TM_1807
Conserved hypothetical protein; Similar to GB:AE000666 percent identity: 54.26; identified by sequence similarity; putative.
  
 
 0.855
TM_1808
Conserved hypothetical protein; Similar to GB:AE000666 percent identity: 53.97; identified by sequence similarity; putative.
  
 
 0.855
TM_1799
Conserved hypothetical protein; Similar to GB:Pyro_h percent identity: 48.98; identified by sequence similarity; putative.
 
  
 0.850
Your Current Organism:
Thermotoga maritima
NCBI taxonomy Id: 243274
Other names: T. maritima MSB8, Thermotoga maritima DSM 3109, Thermotoga maritima MSB8, Thermotoga maritima str. MSB8, Thermotoga maritima strain MSB8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.