STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TM_1811Conserved hypothetical protein; Similar to GB:L77117 PID:1500575 percent identity: 53.23; identified by sequence similarity; putative. (717 aa)    
Predicted Functional Partners:
TM_1809
Conserved hypothetical protein; Similar to GB:Pyro_h percent identity: 65.18; identified by sequence similarity; putative.
 
 
 0.990
TM_1807
Conserved hypothetical protein; Similar to GB:AE000666 percent identity: 54.26; identified by sequence similarity; putative.
 
 
 0.988
TM_1808
Conserved hypothetical protein; Similar to GB:AE000666 percent identity: 53.97; identified by sequence similarity; putative.
 
 
 0.988
TM_1810
Hypothetical protein; Identified by sequence similarity; putative.
  
 
 0.960
TM_1812
Hypothetical protein; Identified by sequence similarity; putative.
 
   
 0.894
TM_1814
Conserved hypothetical protein; CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain sequences complementary to antecedent mobile elements and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA).
 
   
 0.864
TM_1793
Hypothetical protein; Identified by sequence similarity; putative.
 
 
 
 0.808
TM_1792
Conserved hypothetical protein; Similar to GB:AE000782 percent identity: 58.82; identified by sequence similarity; putative.
   
 
 0.782
TM_1791
Conserved hypothetical protein; Similar to GB:AE000782 percent identity: 57.26; identified by sequence similarity; putative.
   
 
 0.779
TM_1813
Hypothetical protein; Identified by sequence similarity; putative.
     
 0.738
Your Current Organism:
Thermotoga maritima
NCBI taxonomy Id: 243274
Other names: T. maritima MSB8, Thermotoga maritima DSM 3109, Thermotoga maritima MSB8, Thermotoga maritima str. MSB8, Thermotoga maritima strain MSB8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.