STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TM_1847ROK family protein; Similar to GB:M27248 SP:P16557 PID:143841 PID:580652 PID:1750123 percent identity: 52.86; identified by sequence similarity; putative. (258 aa)    
Predicted Functional Partners:
TM_0393
Transcriptional regulator, XylR-related; Similar to GP:580652 percent identity: 52.26; identified by sequence similarity; putative.
  
     0.765
TM_1848
Cellobiose-phosphorylase; Similar to GP:3184120 percent identity: 97.66; identified by sequence similarity; putative.
    
 0.717
TM_0808
Transcriptional regulator, XylR-related; Similar to PID:1924925 PID:2398723 percent identity: 52.25; identified by sequence similarity; putative.
  
     0.698
TM_1849
Hypothetical protein; Identified by sequence similarity; putative.
    
  0.418
Your Current Organism:
Thermotoga maritima
NCBI taxonomy Id: 243274
Other names: T. maritima MSB8, Thermotoga maritima DSM 3109, Thermotoga maritima MSB8, Thermotoga maritima str. MSB8, Thermotoga maritima strain MSB8
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