STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TM_1853Sugar ABC transporter, permease protein; Similar to GB:X66092 PID:296356 percent identity: 66.04; identified by sequence similarity; putative. (273 aa)    
Predicted Functional Partners:
TM_1854
Sugar ABC transporter, permease protein; Similar to PID:1652461 percent identity: 60.89; identified by sequence similarity; putative.
  0.978
TM_1855
Sugar ABC transporter, periplasmic sugar-binding protein, putative; Similar to PID:2293414 percent identity: 47.84; identified by sequence similarity; putative.
 
  0.909
TM_0811
Sugar ABC transporter, permease protein; Similar to PID:1652461 percent identity: 68.25; identified by sequence similarity; putative.
  0.893
TM_1121
Glycerol-3-phosphate ABC transporter, permease protein; Similar to SP:P10905 GB:U00039 PID:43247 PID:466588 GB:U00096 percent identity: 61.32; identified by sequence similarity; putative.
  0.889
TM_0278
Sugar ABC transporter, permease protein; Similar to PID:2293415 percent identity: 56.00; identified by sequence similarity; putative.
  0.887
TM_0431
Sugar ABC transporter, permease protein; Similar to PID:1652461 percent identity: 56.20; identified by sequence similarity; putative.
  0.886
TM_0596
Sugar ABC transporter, permease protein; Similar to PID:2337834 percent identity: 61.03; identified by sequence similarity; putative.
  0.886
TM_0419
Sugar ABC transporter, permease protein; Similar to GB:AL009126 percent identity: 54.04; identified by sequence similarity; putative.
  0.885
TM_0595
Sugar ABC transporter, periplasmic sugar-binding protein, putative; Similar to SP:P10904 GB:U00039 GB:M33735 PID:43244 PID:466589 percent identity: 48.57; identified by sequence similarity; putative.
  0.862
TM_1234
Sugar ABC transporter, permease protein; Similar to GB:Pyro_h percent identity: 74.91; identified by sequence similarity; putative.
 
  0.849
Your Current Organism:
Thermotoga maritima
NCBI taxonomy Id: 243274
Other names: T. maritima MSB8, Thermotoga maritima DSM 3109, Thermotoga maritima MSB8, Thermotoga maritima str. MSB8, Thermotoga maritima strain MSB8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.