Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
TM_1855Sugar ABC transporter, periplasmic sugar-binding protein, putative; Similar to PID:2293414 percent identity: 47.84; identified by sequence similarity; putative. (418 aa)    
Predicted Functional Partners:
TM_1854
Sugar ABC transporter, permease protein; Similar to PID:1652461 percent identity: 60.89; identified by sequence similarity; putative.
 
  0.943
TM_1853
Sugar ABC transporter, permease protein; Similar to GB:X66092 PID:296356 percent identity: 66.04; identified by sequence similarity; putative.
 
  0.915
TM_1852
Conserved hypothetical protein; Similar to GB:Pyro_h percent identity: 62.18; identified by sequence similarity; putative.
 
     0.865
TM_1856
Transcriptional regulator, LacI family; Similar to GB:AL009126 percent identity: 52.02; identified by sequence similarity; putative.
       0.738
TM_1851
Alpha-mannosidase, putative; Similar to PID:1001414 PID:1001401 percent identity: 57.81; identified by sequence similarity; putative.
 
     0.727
TM_0432
Sugar ABC transporter, periplasmic sugar-binding protein, putative; Similar to GB:M77351 SP:Q00749 PID:153737 percent identity: 55.25; identified by sequence similarity; putative.
  
   
 0.673
TM_0596
Sugar ABC transporter, permease protein; Similar to PID:2337834 percent identity: 61.03; identified by sequence similarity; putative.
  
  0.629
TM_0812
Sugar ABC transporter, permease protein, putative; Similar to PID:1652996 percent identity: 63.26; identified by sequence similarity; putative.
  
  0.612
TM_0421
Sugar ABC transporter, ATP-binding protein; Similar to GB:Pyro_h percent identity: 71.03; identified by sequence similarity; putative; Belongs to the ABC transporter superfamily.
  
 0.599
TM_1232
Sugar ABC transporter, ATP-binding protein; Similar to GB:Pyro_h percent identity: 78.03; identified by sequence similarity; putative; Belongs to the ABC transporter superfamily.
  
 0.599
Your Current Organism:
Thermotoga maritima
NCBI taxonomy Id: 243274
Other names: T. maritima MSB8, Thermotoga maritima DSM 3109, Thermotoga maritima MSB8, Thermotoga maritima str. MSB8, Thermotoga maritima strain MSB8
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