node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
TDE_1329 | TDE_1332 | TDE_1329 | TDE_1332 | ATPase, AAA family; Identified by match to protein family HMM PF00004. | hflK protein, putative; HflC and HflK could encode or regulate a protease. | 0.532 |
TDE_1329 | TDE_1333 | TDE_1329 | TDE_1333 | ATPase, AAA family; Identified by match to protein family HMM PF00004. | hflC protein, putative; HflC and HflK could regulate a protease. | 0.532 |
TDE_1329 | nrdD | TDE_1329 | TDE_1331 | ATPase, AAA family; Identified by match to protein family HMM PF00004. | Anaerobic ribonucleoside-triphosphate reductase; Identified by similarity to GP:4127320; match to protein family HMM PF03477. | 0.451 |
TDE_1329 | nrdR | TDE_1329 | TDE_1330 | ATPase, AAA family; Identified by match to protein family HMM PF00004. | Conserved hypothetical protein TIGR00244; Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes; Belongs to the NrdR family. | 0.510 |
TDE_1329 | polA | TDE_1329 | TDE_1637 | ATPase, AAA family; Identified by match to protein family HMM PF00004. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.405 |
TDE_1332 | TDE_1329 | TDE_1332 | TDE_1329 | hflK protein, putative; HflC and HflK could encode or regulate a protease. | ATPase, AAA family; Identified by match to protein family HMM PF00004. | 0.532 |
TDE_1332 | TDE_1333 | TDE_1332 | TDE_1333 | hflK protein, putative; HflC and HflK could encode or regulate a protease. | hflC protein, putative; HflC and HflK could regulate a protease. | 0.969 |
TDE_1332 | nrdD | TDE_1332 | TDE_1331 | hflK protein, putative; HflC and HflK could encode or regulate a protease. | Anaerobic ribonucleoside-triphosphate reductase; Identified by similarity to GP:4127320; match to protein family HMM PF03477. | 0.620 |
TDE_1332 | nrdR | TDE_1332 | TDE_1330 | hflK protein, putative; HflC and HflK could encode or regulate a protease. | Conserved hypothetical protein TIGR00244; Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes; Belongs to the NrdR family. | 0.538 |
TDE_1333 | TDE_1329 | TDE_1333 | TDE_1329 | hflC protein, putative; HflC and HflK could regulate a protease. | ATPase, AAA family; Identified by match to protein family HMM PF00004. | 0.532 |
TDE_1333 | TDE_1332 | TDE_1333 | TDE_1332 | hflC protein, putative; HflC and HflK could regulate a protease. | hflK protein, putative; HflC and HflK could encode or regulate a protease. | 0.969 |
TDE_1333 | nrdD | TDE_1333 | TDE_1331 | hflC protein, putative; HflC and HflK could regulate a protease. | Anaerobic ribonucleoside-triphosphate reductase; Identified by similarity to GP:4127320; match to protein family HMM PF03477. | 0.620 |
TDE_1333 | nrdR | TDE_1333 | TDE_1330 | hflC protein, putative; HflC and HflK could regulate a protease. | Conserved hypothetical protein TIGR00244; Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes; Belongs to the NrdR family. | 0.538 |
TDE_2088 | nrdR | TDE_2088 | TDE_1330 | C4 zinc finger domain protein, DksA/TraR family; Identified by match to protein family HMM PF01258. | Conserved hypothetical protein TIGR00244; Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes; Belongs to the NrdR family. | 0.481 |
birA | nadD | TDE_0041 | TDE_1747 | birA bifunctional protein; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a repressor; Belongs to the biotin--protein ligase family. | Nicotinate (nicotinamide) nucleotide adenylyltransferase; Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD). | 0.840 |
birA | nrdA | TDE_0041 | TDE_0341 | birA bifunctional protein; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a repressor; Belongs to the biotin--protein ligase family. | Ribonucleoside-diphosphate reductase, alpha subunit; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides. | 0.438 |
birA | nrdR | TDE_0041 | TDE_1330 | birA bifunctional protein; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a repressor; Belongs to the biotin--protein ligase family. | Conserved hypothetical protein TIGR00244; Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes; Belongs to the NrdR family. | 0.475 |
nadD | birA | TDE_1747 | TDE_0041 | Nicotinate (nicotinamide) nucleotide adenylyltransferase; Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD). | birA bifunctional protein; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a repressor; Belongs to the biotin--protein ligase family. | 0.840 |
nadD | nrdR | TDE_1747 | TDE_1330 | Nicotinate (nicotinamide) nucleotide adenylyltransferase; Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD). | Conserved hypothetical protein TIGR00244; Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes; Belongs to the NrdR family. | 0.492 |
nrdA | birA | TDE_0341 | TDE_0041 | Ribonucleoside-diphosphate reductase, alpha subunit; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides. | birA bifunctional protein; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a repressor; Belongs to the biotin--protein ligase family. | 0.438 |