STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cutE-1Apolipoprotein N-acyltransferase; Catalyzes the phospholipid dependent N-acylation of the N- terminal cysteine of apolipoprotein, the last step in lipoprotein maturation; Belongs to the CN hydrolase family. Apolipoprotein N- acyltransferase subfamily. (544 aa)    
Predicted Functional Partners:
TDE_1709
DNA-binding protein, HU family; Identified by match to protein family HMM PF00216; Belongs to the bacterial histone-like protein family.
       0.831
TDE_1707
Conserved hypothetical protein; Identified by similarity to OMNI:TP0253; match to protein family HMM PF04519.
 
     0.820
cinA
Competence/damage-inducible protein CinA; Identified by similarity to SP:P46323; match to protein family HMM PF02464; match to protein family HMM TIGR00199; Belongs to the CinA family.
       0.767
TDE_2601
Surface antigen, putative; Identified by similarity to GP:7381330; match to protein family HMM PF01103.
 
   
 0.746
cmk-2
Cytidylate kinase/ribosomal protein S1; Identified by match to protein family HMM PF00575; match to protein family HMM PF02224; match to protein family HMM TIGR00017; match to protein family HMM TIGR00717.
 
     0.706
TDE_1043
Membrane protein, putative; Identified by similarity to OMNI:TP0884; match to protein family HMM PF03739.
 
    0.675
rpsT
Ribosomal protein S20; Binds directly to 16S ribosomal RNA.
       0.594
TDE_1711
RelA/SpoT domain protein; Identified by match to protein family HMM PF00515; match to protein family HMM PF04607.
 
     0.507
yidC
Inner membrane protein; Required for the insertion and/or proper folding and/or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins. Aids folding of multispanning membrane proteins.
  
   
 0.507
TDE_2039
Lipoprotein releasing system, permease protein, putative; Identified by similarity to SP:P75958; match to protein family HMM PF02687.
 
   
 0.500
Your Current Organism:
Treponema denticola
NCBI taxonomy Id: 243275
Other names: T. denticola ATCC 35405, Treponema denticola ATCC 35405, Treponema denticola str. ATCC 35405
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.