STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TDE_0484Methyl-accepting chemotaxis protein; Identified by similarity to OMNI:TP0488; match to protein family HMM PF00015; match to protein family HMM PF00672; match to protein family HMM PF02743. (706 aa)    
Predicted Functional Partners:
cheW-1
Chemotaxis protein CheW; Identified by similarity to OMNI:TP0364; match to protein family HMM PF01584; match to protein family HMM PF01739; match to protein family HMM PF03705.
 
 0.994
cheA
Chemotaxis protein CheA; Identified by similarity to GP:1765973; match to protein family HMM PF01584; match to protein family HMM PF01627; match to protein family HMM PF02518; match to protein family HMM PF02895.
 
 0.983
cheW-2
Purine-binding chemotaxis protein; Identified by similarity to OMNI:TP0364; match to protein family HMM PF01584.
 
 0.977
cheB
Protein-glutamate methylesterase; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family.
 
 0.944
cheR
Chemotaxis protein methyltransferase; Identified by similarity to SP:P31105; match to protein family HMM PF01739; match to protein family HMM PF03705.
 
 0.942
cheY
Chemotaxis protein CheY; Identified by similarity to SP:P96126; match to protein family HMM PF00072.
 
 0.891
fliY
Flagellar motor switch protein FliY; FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation. Belongs to the FliN/MopA/SpaO family.
 
 
 0.573
flgC
Flagellar basal-body rod protein FlgC; Identified by similarity to SP:P24501; match to protein family HMM TIGR01395; Belongs to the flagella basal body rod proteins family.
   
   0.527
TDE_2502
Sensor histidine kinase/response regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF00512; match to protein family HMM PF02518.
 
 
 0.522
fliI
Flagellum-specific ATP synthase FliI; Identified by similarity to SP:P23445; match to protein family HMM PF00006; match to protein family HMM PF02874; match to protein family HMM TIGR01026.
  
   0.502
Your Current Organism:
Treponema denticola
NCBI taxonomy Id: 243275
Other names: T. denticola ATCC 35405, Treponema denticola ATCC 35405, Treponema denticola str. ATCC 35405
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