STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TDE_0676Conserved hypothetical protein; Identified by similarity to OMNI:NTL02SP1476; match to protein family HMM PF02082. (139 aa)    
Predicted Functional Partners:
TDE_0103
Aminotransferase, class-V; Identified by match to protein family HMM PF00266.
  
  
 0.824
TDE_0674
Appr-1-p processing enzyme family domain protein; Identified by similarity to OMNI:NTL03SA0302; match to protein family HMM PF01661.
       0.773
TDE_0675
Conserved hypothetical protein; Identified by similarity to GP:19748326.
       0.773
TDE_2053
NifU domain protein; Identified by similarity to SP:P77310; match to protein family HMM PF01592.
  
  
 0.714
TDE_0677
Conserved hypothetical protein; Identified by similarity to OMNI:NTL03CP2236; match to protein family HMM PF01206; Belongs to the sulfur carrier protein TusA family.
     
 0.553
TDE_0802
Conserved hypothetical protein; Identified by similarity to OMNI:SP1627.
 
  
 0.522
TDE_0665
Pyruvate ferredoxin/flavodoxin oxidoreductase family protein; Identified by match to protein family HMM PF00037; match to protein family HMM PF01558; match to protein family HMM PF01855; match to protein family HMM TIGR01612.
     
 0.520
TDE_0673
Membrane protein, putative; Identified by similarity to OMNI:NTL02ML1908; match to protein family HMM PF00892.
     
 0.507
TDE_2167
Pyridine nucleotide-disulphide oxidoreductase family protein; Identified by match to protein family HMM PF00037; match to protein family HMM PF00070.
  
  
 0.489
TDE_0679
Aminotransferase, class V; Identified by match to protein family HMM PF00266; match to protein family HMM TIGR01977.
       0.454
Your Current Organism:
Treponema denticola
NCBI taxonomy Id: 243275
Other names: T. denticola ATCC 35405, Treponema denticola ATCC 35405, Treponema denticola str. ATCC 35405
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.