Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| TDE_1883 | TDE_2091 | TDE_1883 | TDE_2091 | Membrane protein, putative; Identified by similarity to GP:20515627; match to protein family HMM PF00892. | Amino acid ABC transporter, amino acid-binding protein, putative; Identified by similarity to GP:3603430; match to protein family HMM PF00497; Belongs to the bacterial solute-binding protein 3 family. | 0.421 |
| TDE_1883 | TDE_2092 | TDE_1883 | TDE_2092 | Membrane protein, putative; Identified by similarity to GP:20515627; match to protein family HMM PF00892. | Amino acid ABC transporter, amino acid-binding protein, putative; Identified by similarity to SP:P39174; match to protein family HMM PF00497; Belongs to the bacterial solute-binding protein 3 family. | 0.416 |
| TDE_2091 | TDE_1883 | TDE_2091 | TDE_1883 | Amino acid ABC transporter, amino acid-binding protein, putative; Identified by similarity to GP:3603430; match to protein family HMM PF00497; Belongs to the bacterial solute-binding protein 3 family. | Membrane protein, putative; Identified by similarity to GP:20515627; match to protein family HMM PF00892. | 0.421 |
| TDE_2091 | TDE_2092 | TDE_2091 | TDE_2092 | Amino acid ABC transporter, amino acid-binding protein, putative; Identified by similarity to GP:3603430; match to protein family HMM PF00497; Belongs to the bacterial solute-binding protein 3 family. | Amino acid ABC transporter, amino acid-binding protein, putative; Identified by similarity to SP:P39174; match to protein family HMM PF00497; Belongs to the bacterial solute-binding protein 3 family. | 0.977 |
| TDE_2091 | TDE_2502 | TDE_2091 | TDE_2502 | Amino acid ABC transporter, amino acid-binding protein, putative; Identified by similarity to GP:3603430; match to protein family HMM PF00497; Belongs to the bacterial solute-binding protein 3 family. | Sensor histidine kinase/response regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF00512; match to protein family HMM PF02518. | 0.497 |
| TDE_2091 | ffh | TDE_2091 | TDE_2089 | Amino acid ABC transporter, amino acid-binding protein, putative; Identified by similarity to GP:3603430; match to protein family HMM PF00497; Belongs to the bacterial solute-binding protein 3 family. | Signal recognition particle protein; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY. Belongs to the GTP-binding SRP family. SRP54 subfamily. | 0.539 |
| TDE_2091 | gpsA | TDE_2091 | TDE_2090 | Amino acid ABC transporter, amino acid-binding protein, putative; Identified by similarity to GP:3603430; match to protein family HMM PF00497; Belongs to the bacterial solute-binding protein 3 family. | Glycerol-3-phosphate dehydrogenase, NAD-dependent, putative; Identified by similarity to SP:P46919; match to protein family HMM PF01210; Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family. | 0.534 |
| TDE_2092 | TDE_1883 | TDE_2092 | TDE_1883 | Amino acid ABC transporter, amino acid-binding protein, putative; Identified by similarity to SP:P39174; match to protein family HMM PF00497; Belongs to the bacterial solute-binding protein 3 family. | Membrane protein, putative; Identified by similarity to GP:20515627; match to protein family HMM PF00892. | 0.416 |
| TDE_2092 | TDE_2091 | TDE_2092 | TDE_2091 | Amino acid ABC transporter, amino acid-binding protein, putative; Identified by similarity to SP:P39174; match to protein family HMM PF00497; Belongs to the bacterial solute-binding protein 3 family. | Amino acid ABC transporter, amino acid-binding protein, putative; Identified by similarity to GP:3603430; match to protein family HMM PF00497; Belongs to the bacterial solute-binding protein 3 family. | 0.977 |
| TDE_2092 | TDE_2502 | TDE_2092 | TDE_2502 | Amino acid ABC transporter, amino acid-binding protein, putative; Identified by similarity to SP:P39174; match to protein family HMM PF00497; Belongs to the bacterial solute-binding protein 3 family. | Sensor histidine kinase/response regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF00512; match to protein family HMM PF02518. | 0.497 |
| TDE_2092 | ffh | TDE_2092 | TDE_2089 | Amino acid ABC transporter, amino acid-binding protein, putative; Identified by similarity to SP:P39174; match to protein family HMM PF00497; Belongs to the bacterial solute-binding protein 3 family. | Signal recognition particle protein; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY. Belongs to the GTP-binding SRP family. SRP54 subfamily. | 0.511 |
| TDE_2092 | gpsA | TDE_2092 | TDE_2090 | Amino acid ABC transporter, amino acid-binding protein, putative; Identified by similarity to SP:P39174; match to protein family HMM PF00497; Belongs to the bacterial solute-binding protein 3 family. | Glycerol-3-phosphate dehydrogenase, NAD-dependent, putative; Identified by similarity to SP:P46919; match to protein family HMM PF01210; Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family. | 0.505 |
| TDE_2502 | TDE_2091 | TDE_2502 | TDE_2091 | Sensor histidine kinase/response regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF00512; match to protein family HMM PF02518. | Amino acid ABC transporter, amino acid-binding protein, putative; Identified by similarity to GP:3603430; match to protein family HMM PF00497; Belongs to the bacterial solute-binding protein 3 family. | 0.497 |
| TDE_2502 | TDE_2092 | TDE_2502 | TDE_2092 | Sensor histidine kinase/response regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF00512; match to protein family HMM PF02518. | Amino acid ABC transporter, amino acid-binding protein, putative; Identified by similarity to SP:P39174; match to protein family HMM PF00497; Belongs to the bacterial solute-binding protein 3 family. | 0.497 |
| ffh | TDE_2091 | TDE_2089 | TDE_2091 | Signal recognition particle protein; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY. Belongs to the GTP-binding SRP family. SRP54 subfamily. | Amino acid ABC transporter, amino acid-binding protein, putative; Identified by similarity to GP:3603430; match to protein family HMM PF00497; Belongs to the bacterial solute-binding protein 3 family. | 0.539 |
| ffh | TDE_2092 | TDE_2089 | TDE_2092 | Signal recognition particle protein; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY. Belongs to the GTP-binding SRP family. SRP54 subfamily. | Amino acid ABC transporter, amino acid-binding protein, putative; Identified by similarity to SP:P39174; match to protein family HMM PF00497; Belongs to the bacterial solute-binding protein 3 family. | 0.511 |
| ffh | gpsA | TDE_2089 | TDE_2090 | Signal recognition particle protein; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY. Belongs to the GTP-binding SRP family. SRP54 subfamily. | Glycerol-3-phosphate dehydrogenase, NAD-dependent, putative; Identified by similarity to SP:P46919; match to protein family HMM PF01210; Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family. | 0.784 |
| gpsA | TDE_2091 | TDE_2090 | TDE_2091 | Glycerol-3-phosphate dehydrogenase, NAD-dependent, putative; Identified by similarity to SP:P46919; match to protein family HMM PF01210; Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family. | Amino acid ABC transporter, amino acid-binding protein, putative; Identified by similarity to GP:3603430; match to protein family HMM PF00497; Belongs to the bacterial solute-binding protein 3 family. | 0.534 |
| gpsA | TDE_2092 | TDE_2090 | TDE_2092 | Glycerol-3-phosphate dehydrogenase, NAD-dependent, putative; Identified by similarity to SP:P46919; match to protein family HMM PF01210; Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family. | Amino acid ABC transporter, amino acid-binding protein, putative; Identified by similarity to SP:P39174; match to protein family HMM PF00497; Belongs to the bacterial solute-binding protein 3 family. | 0.505 |
| gpsA | ffh | TDE_2090 | TDE_2089 | Glycerol-3-phosphate dehydrogenase, NAD-dependent, putative; Identified by similarity to SP:P46919; match to protein family HMM PF01210; Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family. | Signal recognition particle protein; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY. Belongs to the GTP-binding SRP family. SRP54 subfamily. | 0.784 |