Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
TDE_2132 | TDE_2133 | Cobalt ABC transporter, ATP-binding protein, putative; Probably part of an ABC transporter complex. Responsible for energy coupling to the transport system (By similarity). | Cobalt transport protein, putative. | 0.994 |
TDE_2132 | TDE_2134 | Cobalt ABC transporter, ATP-binding protein, putative; Probably part of an ABC transporter complex. Responsible for energy coupling to the transport system (By similarity). | Hypothetical protein; Identified by Glimmer2; putative. | 0.511 |
TDE_2132 | TDE_2135 | Cobalt ABC transporter, ATP-binding protein, putative; Probably part of an ABC transporter complex. Responsible for energy coupling to the transport system (By similarity). | Conserved hypothetical protein; Identified by similarity to OMNI:NTL03CP0425; match to protein family HMM TIGR01784. | 0.427 |
TDE_2133 | TDE_2132 | Cobalt transport protein, putative. | Cobalt ABC transporter, ATP-binding protein, putative; Probably part of an ABC transporter complex. Responsible for energy coupling to the transport system (By similarity). | 0.994 |
TDE_2133 | TDE_2134 | Cobalt transport protein, putative. | Hypothetical protein; Identified by Glimmer2; putative. | 0.511 |
TDE_2133 | TDE_2135 | Cobalt transport protein, putative. | Conserved hypothetical protein; Identified by similarity to OMNI:NTL03CP0425; match to protein family HMM TIGR01784. | 0.427 |
TDE_2134 | TDE_2132 | Hypothetical protein; Identified by Glimmer2; putative. | Cobalt ABC transporter, ATP-binding protein, putative; Probably part of an ABC transporter complex. Responsible for energy coupling to the transport system (By similarity). | 0.511 |
TDE_2134 | TDE_2133 | Hypothetical protein; Identified by Glimmer2; putative. | Cobalt transport protein, putative. | 0.511 |
TDE_2134 | TDE_2135 | Hypothetical protein; Identified by Glimmer2; putative. | Conserved hypothetical protein; Identified by similarity to OMNI:NTL03CP0425; match to protein family HMM TIGR01784. | 0.631 |
TDE_2135 | TDE_2132 | Conserved hypothetical protein; Identified by similarity to OMNI:NTL03CP0425; match to protein family HMM TIGR01784. | Cobalt ABC transporter, ATP-binding protein, putative; Probably part of an ABC transporter complex. Responsible for energy coupling to the transport system (By similarity). | 0.427 |
TDE_2135 | TDE_2133 | Conserved hypothetical protein; Identified by similarity to OMNI:NTL03CP0425; match to protein family HMM TIGR01784. | Cobalt transport protein, putative. | 0.427 |
TDE_2135 | TDE_2134 | Conserved hypothetical protein; Identified by similarity to OMNI:NTL03CP0425; match to protein family HMM TIGR01784. | Hypothetical protein; Identified by Glimmer2; putative. | 0.631 |