TDE_2622 protein (Treponema denticola) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

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Gene Fusion

Cooccurrence

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Experiments

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[Homology]

Score

TDE_2622

ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005. (470 aa)

Predicted Functional Partners:

TDE_2623

0.972

TDE_2624

0.947

TDE_0242

0.882

TDE_0905

0.882

TDE_2157

0.882

TDE_0283

0.881

TDE_0899

0.881

TDE_0256

0.880

TDE_1597

0.869

TDE_1604

0.855

Your Current Organism:

Treponema denticola

NCBI taxonomy Id: 243275
Other names: T. denticola ATCC 35405, Treponema denticola ATCC 35405, Treponema denticola str. ATCC 35405

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
TDE_0242	TDE_2622	Membrane protein, putative.	ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.	0.882
TDE_0242	TDE_2624	Membrane protein, putative.	Conserved hypothetical protein; Identified by similarity to OMNI:NTL02SP1290.	0.774
TDE_0256	TDE_2622	Conserved hypothetical protein; Identified by similarity to OMNI:EF0580.	ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.	0.880
TDE_0256	TDE_2624	Conserved hypothetical protein; Identified by similarity to OMNI:EF0580.	Conserved hypothetical protein; Identified by similarity to OMNI:NTL02SP1290.	0.773
TDE_0283	TDE_2622	Transporter, putative; Identified by similarity to GP:23325909; match to protein family HMM PF02361.	ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.	0.881
TDE_0283	TDE_2624	Transporter, putative; Identified by similarity to GP:23325909; match to protein family HMM PF02361.	Conserved hypothetical protein; Identified by similarity to OMNI:NTL02SP1290.	0.773
TDE_0899	TDE_2622	ABC transporter, permease protein, putative.	ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.	0.881
TDE_0899	TDE_2624	ABC transporter, permease protein, putative.	Conserved hypothetical protein; Identified by similarity to OMNI:NTL02SP1290.	0.775
TDE_0905	TDE_2622	Membrane protein, putative.	ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.	0.882
TDE_0905	TDE_2624	Membrane protein, putative.	Conserved hypothetical protein; Identified by similarity to OMNI:NTL02SP1290.	0.774
TDE_1597	TDE_1604	Transporter, putative.	ABC transporter, permease protein, putative.	0.497
TDE_1597	TDE_2622	Transporter, putative.	ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.	0.869
TDE_1597	TDE_2624	Transporter, putative.	Conserved hypothetical protein; Identified by similarity to OMNI:NTL02SP1290.	0.734
TDE_1604	TDE_1597	ABC transporter, permease protein, putative.	Transporter, putative.	0.497
TDE_1604	TDE_2622	ABC transporter, permease protein, putative.	ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.	0.855
TDE_1604	TDE_2624	ABC transporter, permease protein, putative.	Conserved hypothetical protein; Identified by similarity to OMNI:NTL02SP1290.	0.763
TDE_2157	TDE_2622	ABC transporter, permease protein, putative; Identified by similarity to GP:23325909.	ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.	0.882
TDE_2157	TDE_2624	ABC transporter, permease protein, putative; Identified by similarity to GP:23325909.	Conserved hypothetical protein; Identified by similarity to OMNI:NTL02SP1290.	0.775
TDE_2622	TDE_0242	ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.	Membrane protein, putative.	0.882
TDE_2622	TDE_0256	ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.	Conserved hypothetical protein; Identified by similarity to OMNI:EF0580.	0.880