TDE_2652 protein (Treponema denticola) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

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Gene Fusion

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Experiments

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[Homology]

Score

TDE_2652

Membrane protein, putative; Identified by similarity to OMNI:NTL03CP0181. (251 aa)

Predicted Functional Partners:

TDE_2651

0.955

TDE_2653

0.953

TDE_0487

0.812

TDE_0893

0.812

TDE_0485

0.804

TDE_0892

0.803

TDE_2654

0.785

TDE_0894

0.771

TDE_2650

0.514

TDE_2648

0.489

Your Current Organism:

Treponema denticola

NCBI taxonomy Id: 243275
Other names: T. denticola ATCC 35405, Treponema denticola ATCC 35405, Treponema denticola str. ATCC 35405

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
TDE_0485	TDE_0487	Membrane protein, putative.	ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.	0.936
TDE_0485	TDE_0892	Membrane protein, putative.	ABC transporter, permease protein.	0.759
TDE_0485	TDE_0893	Membrane protein, putative.	ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.	0.800
TDE_0485	TDE_0894	Membrane protein, putative.	Membrane protein, putative; Identified by similarity to GP:19714438.	0.809
TDE_0485	TDE_2651	Membrane protein, putative.	ABC transporter, ATP-binding protein; Identified by similarity to OMNI:NTL02SP0557; match to protein family HMM PF00005.	0.801
TDE_0485	TDE_2652	Membrane protein, putative.	Membrane protein, putative; Identified by similarity to OMNI:NTL03CP0181.	0.804
TDE_0487	TDE_0485	ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.	Membrane protein, putative.	0.936
TDE_0487	TDE_0892	ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.	ABC transporter, permease protein.	0.797
TDE_0487	TDE_0894	ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.	Membrane protein, putative; Identified by similarity to GP:19714438.	0.815
TDE_0487	TDE_2652	ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.	Membrane protein, putative; Identified by similarity to OMNI:NTL03CP0181.	0.812
TDE_0487	TDE_2653	ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.	Membrane protein, putative.	0.797
TDE_0892	TDE_0485	ABC transporter, permease protein.	Membrane protein, putative.	0.759
TDE_0892	TDE_0487	ABC transporter, permease protein.	ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.	0.797
TDE_0892	TDE_0893	ABC transporter, permease protein.	ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.	0.952
TDE_0892	TDE_0894	ABC transporter, permease protein.	Membrane protein, putative; Identified by similarity to GP:19714438.	0.953
TDE_0892	TDE_2651	ABC transporter, permease protein.	ABC transporter, ATP-binding protein; Identified by similarity to OMNI:NTL02SP0557; match to protein family HMM PF00005.	0.796
TDE_0892	TDE_2652	ABC transporter, permease protein.	Membrane protein, putative; Identified by similarity to OMNI:NTL03CP0181.	0.803
TDE_0892	TDE_2653	ABC transporter, permease protein.	Membrane protein, putative.	0.772
TDE_0893	TDE_0485	ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.	Membrane protein, putative.	0.800
TDE_0893	TDE_0892	ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.	ABC transporter, permease protein.	0.952