TP_0020 protein (Treponema pallidum) - STRING interaction network

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Score

TP_0020

76K protein; Similar to GP:2108236 percent identity: 99.56; identified by sequence similarity; putative. (707 aa)

Predicted Functional Partners:

greA

0.797

TP_0289

0.583

TP_0018

0.520

TP_0017

0.466

Your Current Organism:

Treponema pallidum

NCBI taxonomy Id: 243276
Other names: T. pallidum subsp. pallidum str. Nichols, Treponema pallidum Nichols, Treponema pallidum subsp. pallidum str. Nichols

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
TP_0017	TP_0018	TP_0017	TP_0018	Conserved hypothetical protein; Similar to GB:AE000783 percent identity: 36.16; identified by sequence similarity; putative.	Transcription elongation factor; Similar to GB:AE000783 percent identity: 33.20; identified by sequence similarity; putative.	0.735
TP_0017	TP_0020	TP_0017	TP_0020	Conserved hypothetical protein; Similar to GB:AE000783 percent identity: 36.16; identified by sequence similarity; putative.	76K protein; Similar to GP:2108236 percent identity: 99.56; identified by sequence similarity; putative.	0.466
TP_0017	greA	TP_0017	TP_0019	Conserved hypothetical protein; Similar to GB:AE000783 percent identity: 36.16; identified by sequence similarity; putative.	Transcription elongation factor (greA); Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides.	0.600
TP_0018	TP_0017	TP_0018	TP_0017	Transcription elongation factor; Similar to GB:AE000783 percent identity: 33.20; identified by sequence similarity; putative.	Conserved hypothetical protein; Similar to GB:AE000783 percent identity: 36.16; identified by sequence similarity; putative.	0.735
TP_0018	TP_0020	TP_0018	TP_0020	Transcription elongation factor; Similar to GB:AE000783 percent identity: 33.20; identified by sequence similarity; putative.	76K protein; Similar to GP:2108236 percent identity: 99.56; identified by sequence similarity; putative.	0.520
TP_0018	TP_0289	TP_0018	TP_0289	Transcription elongation factor; Similar to GB:AE000783 percent identity: 33.20; identified by sequence similarity; putative.	Predicted coding region TP0289; Hypothetical protein; identified by Glimmer; putative.	0.501
TP_0018	greA	TP_0018	TP_0019	Transcription elongation factor; Similar to GB:AE000783 percent identity: 33.20; identified by sequence similarity; putative.	Transcription elongation factor (greA); Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides.	0.969
TP_0020	TP_0017	TP_0020	TP_0017	76K protein; Similar to GP:2108236 percent identity: 99.56; identified by sequence similarity; putative.	Conserved hypothetical protein; Similar to GB:AE000783 percent identity: 36.16; identified by sequence similarity; putative.	0.466
TP_0020	TP_0018	TP_0020	TP_0018	76K protein; Similar to GP:2108236 percent identity: 99.56; identified by sequence similarity; putative.	Transcription elongation factor; Similar to GB:AE000783 percent identity: 33.20; identified by sequence similarity; putative.	0.520
TP_0020	TP_0289	TP_0020	TP_0289	76K protein; Similar to GP:2108236 percent identity: 99.56; identified by sequence similarity; putative.	Predicted coding region TP0289; Hypothetical protein; identified by Glimmer; putative.	0.583
TP_0020	greA	TP_0020	TP_0019	76K protein; Similar to GP:2108236 percent identity: 99.56; identified by sequence similarity; putative.	Transcription elongation factor (greA); Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides.	0.797
TP_0289	TP_0018	TP_0289	TP_0018	Predicted coding region TP0289; Hypothetical protein; identified by Glimmer; putative.	Transcription elongation factor; Similar to GB:AE000783 percent identity: 33.20; identified by sequence similarity; putative.	0.501
TP_0289	TP_0020	TP_0289	TP_0020	Predicted coding region TP0289; Hypothetical protein; identified by Glimmer; putative.	76K protein; Similar to GP:2108236 percent identity: 99.56; identified by sequence similarity; putative.	0.583
greA	TP_0017	TP_0019	TP_0017	Transcription elongation factor (greA); Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides.	Conserved hypothetical protein; Similar to GB:AE000783 percent identity: 36.16; identified by sequence similarity; putative.	0.600
greA	TP_0018	TP_0019	TP_0018	Transcription elongation factor (greA); Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides.	Transcription elongation factor; Similar to GB:AE000783 percent identity: 33.20; identified by sequence similarity; putative.	0.969
greA	TP_0020	TP_0019	TP_0020	Transcription elongation factor (greA); Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides.	76K protein; Similar to GP:2108236 percent identity: 99.56; identified by sequence similarity; putative.	0.797

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