STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TP_0073Predicted coding region TP0073; Hypothetical protein; identified by Glimmer; putative. (513 aa)    
Predicted Functional Partners:
TP_0995
Cyclic nucleotide binding protein; Similar to PID:1653946 percent identity: 33.90; identified by sequence similarity; putative.
  
   
 0.828
TP_0854
Predicted coding region TP0854; Hypothetical protein; identified by Glimmer; putative.
  
     0.679
fliO
Hypothetical protein; Similar to PID:1216382 PID:973196 percent identity: 100.00; identified by sequence similarity; putative.
 
     0.647
TP_0519
Response regulatory protein (atoC); Similar to GB:AE000783 percent identity: 54.34; identified by sequence similarity; putative.
    
  0.612
TP_0480
Predicted coding region TP0480; Hypothetical protein; identified by Glimmer; putative.
  
    0.602
TP_0285
Predicted coding region TP0285; Hypothetical protein; identified by Glimmer; putative.
  
     0.566
TP_0915
Conserved hypothetical protein; Similar to GB:AE000783 percent identity: 26.71; identified by sequence similarity; putative.
  
     0.561
TP_0996
Conserved hypothetical protein; Similar to GB:AE000783 percent identity: 30.00; identified by sequence similarity; putative.
  
     0.559
TP_0333
Conserved hypothetical protein; Similar to GB:AE000783 percent identity: 31.40; identified by sequence similarity; putative.
  
     0.538
fliD
Flagellar filament cap protein (fliD); Required for the morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end (By similarity).
 
     0.513
Your Current Organism:
Treponema pallidum
NCBI taxonomy Id: 243276
Other names: T. pallidum subsp. pallidum str. Nichols, Treponema pallidum Nichols, Treponema pallidum subsp. pallidum str. Nichols
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